myRT

myRT report for GCA_003062885.1_ASM306288v1

Download annotations/find similar RTs

Seq: PZNB01000016.1 Klebsiella pneumoniae strain ITU3985 NODE_16_length_151815_cov_148.409, whole genome shotgun sequence (151815 bp)
Overview 1 RT 1: 112922-119790 bp Neighborhood of RT #1 [112922, 119792] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 112922-113650 bp Feature: domain Description: FimC Location: 112970-113633 bp Feature: domain Description: FimC Location: 1 1 2970-1 1 3633 bp Feature: gene Location: 113682-116291 bp Feature: domain Description: FimD Location: 113739-116280 bp Feature: domain Description: FimD Location: 1 1 3739-1 1 6280 bp Feature: gene Location: 116291-118369 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 116699-117143 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 6699-1 1 71 43 bp Feature: gene Location: 118426-118866 bp Feature: domain Description: Integrase_1 Location: 118432-118648 bp Feature: domain Description: Integrase_1 Location: 1 1 8432-1 1 8648 bp Feature: gene Location: 119127-119792 bp Feature: domain Description: INT_P4_C Location: 119232-119790 bp Feature: domain Description: INT_P4_C Location: 1 1 9232-1 1 9790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: PZNB01000064.1 Klebsiella pneumoniae strain ITU3985 NODE_64_length_1894_cov_660.093, whole genome shotgun sequence (1894 bp)
Overview 1 RT 1: 61-1893 bp Neighborhood of RT #1 [61, 1893] RVT-GII Feature: gene Location: 61-1548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466-1156 bp Feature: gene Location: 1702-1893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII