myRT

myRT report for GCA_003063245.1_ASM306324v1

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Seq: MUXE01000010.1 Pseudoarcobacter caeni strain RW17-10 NODE_10_length_92888_cov_40.4833_ID_2067, whole genome shotgun sequence (92888 bp)
Overview 1 RT 1: 56507-61675 bp Neighborhood of RT #1 [56507, 61713] RraA RVT_N RVT-GII GIIM OEP OEP Feature: gene Location: 56507-56896 bp Feature: gene Location: 56964-57566 bp Feature: domain Description: RraA Location: 56976-57519 bp Feature: domain Description: RraA Location: 56976-5751 9 bp Feature: gene Location: 57666-59132 bp Feature: domain Description: RVT_N Location: 57708-57951 bp Feature: domain Description: RVT_N Location: 57708-57951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58002-58662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58002-58662 bp Feature: domain Description: GIIM Note: maturase Location: 58716-58950 bp Feature: domain Description: GIIM Note: maturase Location: 5871 6-58950 bp Feature: gene Location: 60146-60457 bp Feature: gene Location: 60517-61713 bp Feature: domain Description: OEP Location: 60592-61126 bp Feature: domain Description: OEP Location: 60592-61 1 26 bp Feature: domain Description: OEP Location: 61192-61675 bp Feature: domain Description: OEP Location: 61 1 92-61 675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RraA (COG0684), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), OEP (pfam02321)

Seq: MUXE01000017.1 Pseudoarcobacter caeni strain RW17-10 NODE_17_length_43891_cov_38.8812_ID_2081, whole genome shotgun sequence (43891 bp)
Overview 1 RT 1: 39487-43101 bp Neighborhood of RT #1 [39487, 43190] RVT-Retrons DUF1233 Feature: gene Location: 39487-40722 bp Feature: gene Location: 40986-41912 bp Feature: gene Location: 41909-42832 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42011-42584 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 011-42 584 bp Feature: gene Location: 42855-43190 bp Feature: domain Description: DUF1233 Location: 42951-43101 bp Feature: domain Description: DUF12 33 Location: 42 951-43101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF1233 (pfam06806)

Seq: MUXE01000004.1 Pseudoarcobacter caeni strain RW17-10 NODE_4_length_211192_cov_37.7275_ID_2055, whole genome shotgun sequence (211192 bp)
Overview 1 RT 1: 77545-84703 bp Neighborhood of RT #1 [77545, 84703] MPP_PPP_family MPP_PPP_family dnaG group_II_RT_mat RVT-UG6 nitrilase Feature: gene Location: 77545-78240 bp Feature: domain Description: MPP_PPP_family Location: 77560-77998 bp Feature: domain Description: MPP_PPP_family Location: 77560-77998 bp Feature: domain Description: MPP_PPP_family Location: 78025-78163 bp Feature: domain Description: MPP_PPP_family Location: 78025-78163 bp Feature: gene Location: 78412-79419 bp Feature: domain Description: dnaG Location: 78520-79408 bp Feature: domain Description: dnaG Location: 78520-79408 bp Feature: gene Location: 79412-82687 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 79508-79775 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 79508-79775 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 80057-80498 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 80057-80498 bp Feature: gene Location: 82684-83553 bp Feature: domain Description: nitrilase Location: 82882-83401 bp Feature: domain Description: nitrilase Location: 82882-83 401 bp Feature: gene Location: 83960-84703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_PPP_family (cd00144), dnaG (TIGR01391), group_II_RT_mat (TIGR04416), RVT-UG6, nitrilase (cl11424)