myRT

myRT report for GCA_003063415.1_ASM306341v1

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Seq: NESK01000013.1 Limnohabitans sp. 2KL-17 LimC-2KL-17-C13, whole genome shotgun sequence (102047 bp)
Overview 1 RT 1: 174-3408 bp Neighborhood of RT #1 [174, 3408] RVT-UG17 SLATT_5 Feature: gene Location: 174-1412 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 411-1005 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 41 1 -1 005 bp Feature: gene Location: 1400-1945 bp Feature: domain Description: SLATT_5 Location: 1415-1925 bp Feature: domain Description: SLATT_5 Location: 1 41 5-1 925 bp Feature: gene Location: 2791-3408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)

Seq: NESK01000031.1 Limnohabitans sp. 2KL-17 LimC-2KL-17-C31, whole genome shotgun sequence (45979 bp)
Overview 1 RT 1: 43887-45806 bp Neighborhood of RT #1 [43887, 45811] IVD PaaI RVT-GII Feature: gene Location: 43887-45068 bp Feature: domain Description: IVD Location: 43920-45054 bp Feature: domain Description: IVD Location: 4392 0-45054 bp Feature: gene Location: 45113-45547 bp Feature: domain Description: PaaI Location: 45146-45536 bp Feature: domain Description: PaaI Location: 45146-45536 bp Feature: gene Location: 45665-45811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45671-45806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45671-45806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IVD (cd01156), PaaI (COG2050), RVT-GII

Seq: NESK01000040.1 Limnohabitans sp. 2KL-17 LimC-2KL-17-C40, whole genome shotgun sequence (18466 bp)
Overview 1 RT 1: 117-1475 bp Neighborhood of RT #1 [117, 1475] RVT_N RVT-GII Feature: gene Location: 117-923 bp Feature: domain Description: RVT_N Location: 192-435 bp Feature: domain Description: RVT_N Location: 192-43 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-909 bp Feature: gene Location: 920-1270 bp Feature: gene Location: 1311-1475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII