myRT

myRT report for GCA_003064065.1_ASM306406v1

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Seq: QAXQ01000021.1 Escherichia sp. R8 NODE_27_length_78210_cov_33.210880, whole genome shotgun sequence (78342 bp)
Overview 1 RT 1: 49320-55351 bp Neighborhood of RT #1 [49320, 55351] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 49320-50240 bp Feature: domain Description: AbiEii Location: 49362-50103 bp Feature: domain Description: AbiEii Location: 49362-501 03 bp Feature: gene Location: 50227-51030 bp Feature: domain Description: AbiEi_3_N Location: 50260-50521 bp Feature: domain Description: AbiEi_3_N Location: 50260-50521 bp Feature: domain Description: AbiEi_3 Location: 50533-50989 bp Feature: domain Description: AbiEi_3 Location: 50533-50989 bp Feature: gene Location: 51325-54534 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 51853-52342 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 51 853-52342 bp Feature: domain Description: nitrilase Location: 53848-54445 bp Feature: domain Description: nitrilase Location: 53848-54445 bp Feature: gene Location: 54695-54835 bp Feature: domain Description: Phage_ASH Location: 54722-54815 bp Feature: domain Description: Phage_ASH Location: 54722-5481 5 bp Feature: gene Location: 54881-55351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: QAXQ01000034.1 Escherichia sp. R8 NODE_40_length_27335_cov_37.433838, whole genome shotgun sequence (27467 bp)
Overview 1 RT 1: 15416-19699 bp Neighborhood of RT #1 [15416, 19707] RVT-GII RVT-GII GIIM YesM Feature: gene Location: 15416-16321 bp Feature: gene Location: 16459-16650 bp Feature: gene Location: 16807-17346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17137-17215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17137-172 15 bp Feature: gene Location: 17374-17895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17380-17662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17380-17662 bp Feature: domain Description: GIIM Note: maturase Location: 17710-17890 bp Feature: domain Description: GIIM Note: maturase Location: 17710-17890 bp Feature: gene Location: 18217-18405 bp Feature: gene Location: 18445-19707 bp Feature: domain Description: YesM Location: 18958-19699 bp Feature: domain Description: YesM Location: 18958-19699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: QAXQ01000053.1 Escherichia sp. R8 NODE_61_length_705_cov_7.892199, whole genome shotgun sequence (837 bp)
Overview 1 RT 1: 1-832 bp Neighborhood of RT #1 [1, 834] RVT-UNC RT_RNaseH_2 Feature: gene Location: 1-834 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 232-370 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 23 2-3 70 bp Feature: domain Description: RT_RNaseH_2 Location: 592-832 bp Feature: domain Description: RT_RNaseH_2 Location: 592-83 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG21/RVT-UG26/RVT-UG18(RVT-UNC), RT_RNaseH_2 (pfam17919)

Seq: QAXQ01000080.1 Escherichia sp. R8 NODE_91_length_2140_cov_87.752800, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)