myRT

myRT report for GCA_003064325.1_ASM306432v1

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Seq: QARO01000105.1 Salmonella enterica subsp. enterica strain CFSAN058610 SRR6919489_NODE_105, whole genome shotgun sequence (2261 bp)
Overview 1 RT 1: 704-1768 bp Neighborhood of RT #1 [704, 2064] PerC RVT-GII Feature: gene Location: 704-949 bp Feature: gene Location: 969-1247 bp Feature: domain Description: PerC Location: 984-1206 bp Feature: domain Description: PerC Location: 984-1 206 bp Feature: gene Location: 1432-2064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1540-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 540-1 768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerC (pfam06069), RVT-GII

Seq: QARO01000110.1 Salmonella enterica subsp. enterica strain CFSAN058610 SRR6919489_NODE_110, whole genome shotgun sequence (2007 bp)
Overview 1 RT 1: 108-1338 bp Neighborhood of RT #1 [108, 1445] RVT-GII GIIM Feature: gene Location: 108-1445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411-1044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 411-1044 bp Feature: domain Description: GIIM Note: maturase Location: 1116-1338 bp Feature: domain Description: GIIM Note: maturase Location: 1116-1338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QARO01000117.1 Salmonella enterica subsp. enterica strain CFSAN058610 SRR6919489_NODE_117, whole genome shotgun sequence (1735 bp)
Overview 1 RT 1: 251-1609 bp Neighborhood of RT #1 [251, 1635] RVT-GII Feature: gene Location: 251-457 bp Feature: gene Location: 506-685 bp Feature: gene Location: 730-1635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1090-1609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1090-1609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QARO01000129.1 Salmonella enterica subsp. enterica strain CFSAN058610 SRR6919489_NODE_129, whole genome shotgun sequence (1439 bp)
Overview 1 RT 1: 116-1262 bp Neighborhood of RT #1 [116, 1363] RVT-GII GIIM Feature: gene Location: 116-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320-974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320-974 bp Feature: domain Description: GIIM Note: maturase Location: 1058-1262 bp Feature: domain Description: GIIM Note: maturase Location: 1058-1262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QARO01000151.1 Salmonella enterica subsp. enterica strain CFSAN058610 SRR6919489_NODE_151, whole genome shotgun sequence (742 bp)
Overview 1 RT 1: 80-596 bp Neighborhood of RT #1 [80, 631] RVT-UG4 Feature: gene Location: 80-631 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 251-596 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 25 1-5 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: QARO01000023.1 Salmonella enterica subsp. enterica strain CFSAN058610 SRR6919489_NODE_23, whole genome shotgun sequence (81862 bp)
Overview 1 RT 1: 16371-27422 bp Neighborhood of RT #1 [16371, 27427] SunT DDE_Tnp_1_5 RVT_N RVT-GII INT_RitC_C_like INT_RitB_C_like Phage_int_SAM_4 INT_RitA_C_like RVT-GII GIIM Transposase_20 GanA Feature: gene Location: 16371-18470 bp Feature: domain Description: SunT Location: 16431-18462 bp Feature: domain Description: SunT Location: 16 431-1846 2 bp Feature: gene Location: 18502-19371 bp Feature: domain Description: DDE_Tnp_1_5 Location: 18604-18922 bp Feature: domain Description: DDE_Tnp_1_5 Location: 186 04-18922 bp Feature: gene Location: 20146-20817 bp Feature: domain Description: RVT_N Location: 20149-20341 bp Feature: domain Description: RVT_N Location: 20149-20341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20386-20761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20386 -2076 1 bp Feature: gene Location: 20867-21424 bp Feature: domain Description: INT_RitC_C_like Location: 20870-21344 bp Feature: domain Description: INT_RitC_C_like Location: 20870-21344 bp Feature: gene Location: 21414-21803 bp Feature: gene Location: 21814-22791 bp Feature: domain Description: INT_RitB_C_like Location: 22147-22729 bp Feature: domain Description: INT_RitB_C_like Location: 22147-22729 bp Feature: gene Location: 22791-23690 bp Feature: domain Description: Phage_int_SAM_4 Location: 23130-23349 bp Feature: domain Description: Phage_int_SAM_4 Location: 23130-23349 bp Feature: domain Description: INT_RitA_C_like Location: 23361-23655 bp Feature: domain Description: INT_RitA_C_like Location: 2336 1-236 55 bp Feature: gene Location: 23882-24619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23912-24098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23912-24098 bp Feature: domain Description: GIIM Note: maturase Location: 24152-24386 bp Feature: domain Description: GIIM Note: maturase Location: 24152-24386 bp Feature: gene Location: 24961-25230 bp Feature: domain Description: Transposase_20 Location: 24964-25099 bp Feature: domain Description: Transposase_20 Location: 2496 4-25099 bp Feature: gene Location: 25379-27427 bp Feature: domain Description: GanA Location: 25412-27422 bp Feature: domain Description: GanA Location: 25412-27422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SunT (COG2274), DDE_Tnp_1_5 (pfam13737), RVT_N (pfam13655), RVT-GII, INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797), Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), GIIM (pfam08388), Transposase_20 (pfam02371)
GanA (COG1874)