myRT

myRT report for GCA_003064425.1_ASM306442v1

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Seq: QART01000036.1 Salmonella enterica subsp. enterica strain CFSAN058604 SRR6919815_NODE_36, whole genome shotgun sequence (13062 bp)
Overview 1 RT 1: 5477-12039 bp Neighborhood of RT #1 [5477, 12059] HTH_XRE PRK09738 RVT_N RVT-GII YkfC HNHc FimD FimC Feature: gene Location: 5477-5746 bp Feature: domain Description: HTH_XRE Location: 5492-5594 bp Feature: domain Description: HTH_XRE Location: 5492-5594 bp Feature: gene Location: 6241-6420 bp Feature: domain Description: PRK09738 Location: 6244-6397 bp Feature: domain Description: PRK09738 Location: 6244-6397 bp Feature: gene Location: 6977-8650 bp Feature: RT Description: RVT_N Location: 7037-7280 bp Feature: RT Description: RVT_N Location: 7037-7280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7325-7967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7325-7967 bp Feature: domain Description: YkfC Location: 8096-8267 bp Feature: domain Description: YkfC Location: 8096-8267 bp Feature: domain Description: HNHc Note: nucleases Location: 8465-8627 bp Feature: domain Description: HNHc Note: nucleases Location: 8465-8627 bp Feature: gene Location: 8936-11374 bp Feature: domain Description: FimD Location: 8972-11369 bp Feature: domain Description: FimD Location: 8972-1 1 369 bp Feature: gene Location: 11364-12059 bp Feature: domain Description: FimC Location: 11379-12039 bp Feature: domain Description: FimC Location: 1 1 379-1 2039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), HTH_XRE (smart00530), PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), FimD (COG3188)