myRT

myRT report for GCA_003067965.1_ASM306796v1

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Seq: QAPT01000001.1 Salmonella enterica subsp. enterica strain CFSAN058589 SRR6919744_NODE_1, whole genome shotgun sequence (721440 bp)
Overview 1 RT 1: 624359-630643 bp Neighborhood of RT #1 [624359, 630643] PRK15246 RVT-UG8 Feature: gene Location: 624359-625117 bp Feature: domain Description: PRK15246 Location: 624419-625115 bp Feature: domain Description: PRK1 5246 Location: 62441 9-6251 1 5 bp Feature: gene Location: 625165-625359 bp Feature: gene Location: 625937-627955 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 626510-626963 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 62651 0-626963 bp Feature: gene Location: 629531-629665 bp Feature: gene Location: 629882-630643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15246 (fimbrial assembly chaperone), RVT-UG8

Seq: QAPT01000020.1 Salmonella enterica subsp. enterica strain CFSAN058589 SRR6919744_NODE_20, whole genome shotgun sequence (35446 bp)
Overview 1 RT 1: 11871-15706 bp Neighborhood of RT #1 [11871, 15706] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 11871-12158 bp Feature: gene Location: 12252-12521 bp Feature: domain Description: HTH_XRE Location: 12267-12369 bp Feature: domain Description: HTH_XRE Location: 12 2 67-12 369 bp Feature: gene Location: 12767-14440 bp Feature: domain Description: RVT_N Location: 12827-13070 bp Feature: domain Description: RVT_N Location: 12 82 7-13070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13115-13757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13115-13757 bp Feature: domain Description: YkfC Location: 13886-14057 bp Feature: domain Description: YkfC Location: 13886-14057 bp Feature: domain Description: HNHc Note: nucleases Location: 14255-14417 bp Feature: domain Description: HNHc Note: nucleases Location: 142 55-14417 bp Feature: gene Location: 14997-15176 bp Feature: domain Description: PRK09738 Location: 15000-15153 bp Feature: domain Description: PRK09738 Location: 15000-15153 bp Feature: gene Location: 15380-15706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)