myRT

myRT report for GCA_003068325.1_ASM306832v1

Download annotations/find similar RTs

Seq: QAQN01000021.1 Salmonella enterica subsp. enterica strain CFSAN058528 SRR6919708_NODE_21, whole genome shotgun sequence (97787 bp)
Overview 1 RT 1: 19349-25911 bp Neighborhood of RT #1 [19349, 25931] HTH_XRE PRK09738 RVT_N RVT-GII YkfC HNHc FimD FimC Feature: gene Location: 19349-19618 bp Feature: domain Description: HTH_XRE Location: 19364-19466 bp Feature: domain Description: HTH_XRE Location: 1 9364-1 9466 bp Feature: gene Location: 20113-20292 bp Feature: domain Description: PRK09738 Location: 20116-20269 bp Feature: domain Description: PRK09738 Location: 201 1 6-20269 bp Feature: gene Location: 20849-22522 bp Feature: RT Description: RVT_N Location: 20909-21152 bp Feature: RT Description: RVT_N Location: 20909-21 1 52 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21197-21839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 1 97-21 839 bp Feature: domain Description: YkfC Location: 21968-22139 bp Feature: domain Description: YkfC Location: 21 968-221 39 bp Feature: domain Description: HNHc Note: nucleases Location: 22337-22499 bp Feature: domain Description: HNHc Note: nucleases Location: 22337-22499 bp Feature: gene Location: 22808-25099 bp Feature: domain Description: FimD Location: 22835-25094 bp Feature: domain Description: FimD Location: 22835-25094 bp Feature: gene Location: 25236-25931 bp Feature: domain Description: FimC Location: 25251-25911 bp Feature: domain Description: FimC Location: 25251 -2591 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), FimD (COG3188), FimC (COG3121)