myRT

myRT report for GCA_003068985.1_ASM306898v1

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Seq: QBIJ01000014.1 Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN051010 CFSAN051010_14, whole genome shotgun sequence (129056 bp)
Overview 1 RT 1: 68909-74095 bp Neighborhood of RT #1 [68909, 74130] TIGR02646 COG3950 RVT-Retrons proA Feature: gene Location: 68909-69685 bp Feature: domain Description: TIGR02646 Location: 68981-69509 bp Feature: domain Description: TIGR02646 Location: 68981 -69509 bp Feature: gene Location: 69669-71297 bp Feature: domain Description: COG3950 Location: 69852-71025 bp Feature: domain Description: COG3950 Location: 69852-71 025 bp Feature: gene Location: 71299-72237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71398-71995 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71 398-71 995 bp Feature: gene Location: 72609-72797 bp Feature: gene Location: 72880-74130 bp Feature: domain Description: proA Location: 72907-74095 bp Feature: domain Description: proA Location: 72907-74095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, proA (TIGR00407)

Seq: QBIJ01000002.1 Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN051010 CFSAN051010_2, whole genome shotgun sequence (414442 bp)
Overview 1 RT 1: 144969-147305 bp Neighborhood of RT #1 [144969, 147305] HTH_XRE RVT-Retrons Feature: gene Location: 144969-145268 bp Feature: gene Location: 145305-145613 bp Feature: domain Description: HTH_XRE Location: 145317-145482 bp Feature: domain Description: HTH_XRE Location: 145317-145482 bp Feature: gene Location: 145591-146541 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145771-146314 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145771-146314 bp Feature: gene Location: 146681-147112 bp Feature: gene Location: 147111-147305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons

Seq: QBIJ01000005.1 Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN051010 CFSAN051010_5, whole genome shotgun sequence (238780 bp)
Overview 1 RT 1: 234017-238167 bp Neighborhood of RT #1 [234017, 238187] Tra5 TIR-like RVT-Retrons PHA02517 Feature: gene Location: 234017-234640 bp Feature: domain Description: Tra5 Location: 234038-234599 bp Feature: domain Description: Tra5 Location: 23 403 8-23 4599 bp Feature: gene Location: 234895-235755 bp Feature: domain Description: TIR-like Location: 235321-235675 bp Feature: domain Description: TIR-like Location: 23 53 21-23 5675 bp Feature: gene Location: 235784-236743 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 235964-236486 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23 5964-23 6486 bp Feature: gene Location: 236774-237001 bp Feature: gene Location: 237369-238187 bp Feature: domain Description: PHA02517 Location: 237396-238167 bp Feature: domain Description: PHA02517 Location: 23 73 96-23 8167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), TIR-like (pfam10137), RVT-Retrons, PHA02517 (putative transposase OrfB; Reviewed)