myRT

myRT report for GCA_003069065.1_ASM306906v1

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Seq: QBIR01000001.1 Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN051000 CFSAN051000_1, whole genome shotgun sequence (652676 bp)
Overview 1 RT 1: 1304-4525 bp 2 RT 2: 505594-507930 bp Neighborhood of RT #1 [1304, 4566] RVT-Retrons TIR-like Tra5 Neighborhood of RT #2 [505594, 507930] RVT-Retrons HTH_XRE Feature: gene Location: 1304-1435 bp Feature: gene Location: 1582-1809 bp Feature: gene Location: 1840-2799 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2020-2542 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2020-2542 bp Feature: gene Location: 2849-3688 bp Feature: domain Description: TIR-like Location: 3254-3608 bp Feature: domain Description: TIR-like Location: 3254-3608 bp Feature: gene Location: 3943-4566 bp Feature: domain Description: Tra5 Location: 3964-4525 bp Feature: domain Description: Tra5 Location: 3964-4525 bp Feature: gene Location: 505594-505788 bp Feature: gene Location: 505787-506218 bp Feature: gene Location: 506358-507308 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 506538-507081 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 506538-507081 bp Feature: gene Location: 507286-507594 bp Feature: domain Description: HTH_XRE Location: 507298-507463 bp Feature: domain Description: HTH_XRE Location: 507298-507463 bp Feature: gene Location: 507631-507930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR-like (pfam10137), Tra5 (COG2801), HTH_XRE (smart00530)

Seq: QBIR01000007.1 Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN051000 CFSAN051000_7, whole genome shotgun sequence (248901 bp)
Overview 1 RT 1: 188551-193737 bp Neighborhood of RT #1 [188551, 193772] TIGR02646 COG3950 RVT-Retrons proA Feature: gene Location: 188551-189327 bp Feature: domain Description: TIGR02646 Location: 188623-189151 bp Feature: domain Description: TIGR02 646 Location: 18862 3-189151 bp Feature: gene Location: 189311-190939 bp Feature: domain Description: COG3950 Location: 189494-190667 bp Feature: domain Description: COG3950 Location: 189494-190667 bp Feature: gene Location: 190941-191879 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191040-191637 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 191040-191637 bp Feature: gene Location: 192251-192439 bp Feature: gene Location: 192522-193772 bp Feature: domain Description: proA Location: 192549-193737 bp Feature: domain Description: proA Location: 192 549-193737 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, proA (TIGR00407)