myRT

myRT report for GCA_003069145.1_ASM306914v1

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Seq: QBJG01000016.1 Salmonella enterica subsp. enterica strain CFSAN058587 CFSAN058587_16, whole genome shotgun sequence (83319 bp)
Overview 1 RT 1: 60457-64292 bp Neighborhood of RT #1 [60457, 64292] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 60457-60744 bp Feature: gene Location: 60838-61107 bp Feature: domain Description: HTH_XRE Location: 60853-60955 bp Feature: domain Description: HTH_XRE Location: 60853-60955 bp Feature: gene Location: 61353-63026 bp Feature: domain Description: RVT_N Location: 61413-61656 bp Feature: domain Description: RVT_N Location: 61 41 3-61 656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61701-62343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 701 -62343 bp Feature: domain Description: YkfC Location: 62472-62643 bp Feature: domain Description: YkfC Location: 62472-62643 bp Feature: domain Description: HNHc Note: nucleases Location: 62841-63003 bp Feature: domain Description: HNHc Note: nucleases Location: 62841 -63003 bp Feature: gene Location: 63583-63762 bp Feature: domain Description: PRK09738 Location: 63586-63739 bp Feature: domain Description: PRK09738 Location: 63586-63739 bp Feature: gene Location: 63966-64292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)

Seq: QBJG01000007.1 Salmonella enterica subsp. enterica strain CFSAN058587 CFSAN058587_7, whole genome shotgun sequence (265039 bp)
Overview 1 RT 1: 90457-97071 bp Neighborhood of RT #1 [90457, 97073] RVT-UG8 PRK15246 Feature: gene Location: 90457-90621 bp Feature: gene Location: 90797-91558 bp Feature: gene Location: 93477-95495 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 94050-94503 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 94050-94503 bp Feature: gene Location: 96034-96267 bp Feature: gene Location: 96315-97073 bp Feature: domain Description: PRK15246 Location: 96375-97071 bp Feature: domain Description: PRK152 46 Location: 96375-97071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, PRK15246 (fimbrial assembly chaperone)