myRT

myRT report for GCA_003069225.1_ASM306922v1

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Seq: QBJN01000001.1 Salmonella enterica subsp. enterica strain CFSAN058579 CFSAN058579_1, whole genome shotgun sequence (721439 bp)
Overview 1 RT 1: 624358-630642 bp Neighborhood of RT #1 [624358, 630642] PRK15246 RVT-UG8 Feature: gene Location: 624358-625116 bp Feature: domain Description: PRK15246 Location: 624418-625114 bp Feature: domain Description: PRK1 5246 Location: 62441 8-6251 1 4 bp Feature: gene Location: 625164-625358 bp Feature: gene Location: 625936-627954 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 626509-626962 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 626509-626962 bp Feature: gene Location: 629530-629664 bp Feature: gene Location: 629881-630642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15246 (fimbrial assembly chaperone), RVT-UG8

Seq: QBJN01000015.1 Salmonella enterica subsp. enterica strain CFSAN058579 CFSAN058579_15, whole genome shotgun sequence (83350 bp)
Overview 1 RT 1: 60458-64293 bp Neighborhood of RT #1 [60458, 64293] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 60458-60745 bp Feature: gene Location: 60839-61108 bp Feature: domain Description: HTH_XRE Location: 60854-60956 bp Feature: domain Description: HTH_XRE Location: 60854-60956 bp Feature: gene Location: 61354-63027 bp Feature: domain Description: RVT_N Location: 61414-61657 bp Feature: domain Description: RVT_N Location: 61414-61657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61702-62344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61702 -62 344 bp Feature: domain Description: YkfC Location: 62473-62644 bp Feature: domain Description: YkfC Location: 62 473-62 644 bp Feature: domain Description: HNHc Note: nucleases Location: 62842-63004 bp Feature: domain Description: HNHc Note: nucleases Location: 62 842 -63004 bp Feature: gene Location: 63584-63763 bp Feature: domain Description: PRK09738 Location: 63587-63740 bp Feature: domain Description: PRK09738 Location: 63587-63740 bp Feature: gene Location: 63967-64293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)