myRT

myRT report for GCA_003069245.1_ASM306924v1

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Seq: QBJO01000001.1 Salmonella enterica subsp. enterica strain CFSAN058578 CFSAN058578_1, whole genome shotgun sequence (721439 bp)
Overview 1 RT 1: 624358-630642 bp Neighborhood of RT #1 [624358, 630642] PRK15246 RVT-UG8 Feature: gene Location: 624358-625116 bp Feature: domain Description: PRK15246 Location: 624418-625114 bp Feature: domain Description: PRK1 5246 Location: 62441 8-6251 1 4 bp Feature: gene Location: 625164-625358 bp Feature: gene Location: 625936-627954 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 626509-626962 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 626509-626962 bp Feature: gene Location: 629530-629664 bp Feature: gene Location: 629881-630642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15246 (fimbrial assembly chaperone), RVT-UG8

Seq: QBJO01000012.1 Salmonella enterica subsp. enterica strain CFSAN058578 CFSAN058578_12, whole genome shotgun sequence (103067 bp)
Overview 1 RT 1: 80175-84010 bp Neighborhood of RT #1 [80175, 84010] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 80175-80462 bp Feature: gene Location: 80556-80825 bp Feature: domain Description: HTH_XRE Location: 80571-80673 bp Feature: domain Description: HTH_XRE Location: 80571-80673 bp Feature: gene Location: 81071-82744 bp Feature: domain Description: RVT_N Location: 81131-81374 bp Feature: domain Description: RVT_N Location: 81131-81374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81419-82061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81419-82 061 bp Feature: domain Description: YkfC Location: 82190-82361 bp Feature: domain Description: YkfC Location: 82 190-82 361 bp Feature: domain Description: HNHc Note: nucleases Location: 82559-82721 bp Feature: domain Description: HNHc Note: nucleases Location: 82 559-82 72 1 bp Feature: gene Location: 83301-83480 bp Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: gene Location: 83684-84010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)