myRT

myRT report for GCA_003069385.1_ASM306938v1

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Seq: QBJX01000013.1 Salmonella enterica subsp. enterica strain CFSAN058568 CFSAN058568_13, whole genome shotgun sequence (83393 bp)
Overview 1 RT 1: 19034-22869 bp Neighborhood of RT #1 [19034, 22869] PRK09738 RVT_N RVT-GII YkfC HNHc HTH_XRE Feature: gene Location: 19034-19360 bp Feature: gene Location: 19564-19743 bp Feature: domain Description: PRK09738 Location: 19567-19720 bp Feature: domain Description: PRK09738 Location: 1 9567-1 9720 bp Feature: gene Location: 20300-21973 bp Feature: domain Description: RVT_N Location: 20360-20603 bp Feature: domain Description: RVT_N Location: 20360-20603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20648-21290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20648-21 290 bp Feature: domain Description: YkfC Location: 21419-21590 bp Feature: domain Description: YkfC Location: 21 41 9-21 590 bp Feature: domain Description: HNHc Note: nucleases Location: 21788-21950 bp Feature: domain Description: HNHc Note: nucleases Location: 21 788-21 950 bp Feature: gene Location: 22219-22488 bp Feature: domain Description: HTH_XRE Location: 22234-22336 bp Feature: domain Description: HTH_XRE Location: 22234-22336 bp Feature: gene Location: 22582-22869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), HTH_XRE (smart00530)

Seq: QBJX01000007.1 Salmonella enterica subsp. enterica strain CFSAN058568 CFSAN058568_7, whole genome shotgun sequence (343084 bp)
Overview 1 RT 1: 246002-252287 bp Neighborhood of RT #1 [246002, 252287] PRK15246 RVT-UG8 Feature: gene Location: 246002-246760 bp Feature: domain Description: PRK15246 Location: 246062-246758 bp Feature: domain Description: PRK152 46 Location: 2 46062 -2 46758 bp Feature: gene Location: 246808-247002 bp Feature: gene Location: 247580-249598 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 248153-248606 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 48153-2 48606 bp Feature: gene Location: 251175-251309 bp Feature: gene Location: 251526-252287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15246 (fimbrial assembly chaperone), RVT-UG8