myRT

myRT report for GCA_003074455.1_ASM307445v1

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Seq: PQCI01000007.1 Escherichia coli strain BMX2_J05303_8/8TZP NODE_7_length_234695_cov_17.8033, whole genome shotgun sequence (234645 bp)
Overview 1 RT 1: 6942-11168 bp Neighborhood of RT #1 [6942, 11266] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI YhhI Feature: gene Location: 6942-7901 bp Feature: domain Description: YhhI Location: 6948-7293 bp Feature: domain Description: YhhI Location: 6948-7293 bp Feature: domain Description: YhhI Location: 7350-7704 bp Feature: domain Description: YhhI Location: 7350-7704 bp Feature: domain Description: YhhI Location: 7704-7884 bp Feature: domain Description: YhhI Location: 7704-7884 bp Feature: gene Location: 7929-8069 bp Feature: gene Location: 8433-9683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8637-9294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8637-9294 bp Feature: domain Description: GIIM Note: maturase Location: 9375-9597 bp Feature: domain Description: GIIM Note: maturase Location: 9375-9597 bp Feature: gene Location: 9694-9954 bp Feature: domain Description: YhhI Location: 9769-9940 bp Feature: domain Description: YhhI Location: 9769-9940 bp Feature: gene Location: 10130-11266 bp Feature: domain Description: YhhI Location: 10133-10496 bp Feature: domain Description: YhhI Location: 1 01 33-1 0496 bp Feature: domain Description: YhhI Location: 10553-10907 bp Feature: domain Description: YhhI Location: 1 0553-1 0907 bp Feature: domain Description: YhhI Location: 10925-11168 bp Feature: domain Description: YhhI Location: 1 0925-1 1 1 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: PQCI01000021.1 Escherichia coli strain BMX2_J05303_8/8TZP NODE_21_length_84463_cov_16.2689, whole genome shotgun sequence (84434 bp)
Overview 1 RT 1: 79931-84220 bp Neighborhood of RT #1 [79931, 84432] AAA_15 RVT-Retrons Feature: gene Location: 79931-80236 bp Feature: gene Location: 81118-83394 bp Feature: domain Description: AAA_15 Location: 81151-82159 bp Feature: domain Description: AAA_15 Location: 81151-82 159 bp Feature: gene Location: 83509-84432 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83692-84220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83692 -842 2 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons

Seq: PQCI01000029.1 Escherichia coli strain BMX2_J05303_8/8TZP NODE_29_length_42110_cov_29.1499, whole genome shotgun sequence (42076 bp)
Overview 1 RT 1: 35984-39221 bp Neighborhood of RT #1 [35984, 39286] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 35984-36388 bp Feature: domain Description: InsE Location: 36014-36350 bp Feature: domain Description: InsE Location: 3 6014-3 63 50 bp Feature: gene Location: 36417-36773 bp Feature: domain Description: PHA02517 Location: 36420-36729 bp Feature: domain Description: PHA02517 Location: 3 6420-3 6729 bp Feature: gene Location: 36890-38413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37163-37895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7163 -3 7895 bp Feature: domain Description: GIIM Note: maturase Location: 37970-38168 bp Feature: domain Description: GIIM Note: maturase Location: 3 7970-3 8168 bp Feature: gene Location: 38367-38792 bp Feature: gene Location: 39005-39286 bp Feature: domain Description: PHA02517 Location: 39011-39221 bp Feature: domain Description: PHA02517 Location: 3 9011-3 9221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: PQCI01000039.1 Escherichia coli strain BMX2_J05303_8/8TZP NODE_39_length_27221_cov_46.7829, whole genome shotgun sequence (27189 bp)
Overview 1 RT 1: 8036-10711 bp Neighborhood of RT #1 [8036, 10719] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 8036-8362 bp Feature: domain Description: InsE Location: 8039-8360 bp Feature: domain Description: InsE Location: 8039-8360 bp Feature: gene Location: 8362-8841 bp Feature: domain Description: PHA02517 Location: 8422-8776 bp Feature: domain Description: PHA02517 Location: 84 22-8776 bp Feature: gene Location: 9433-9936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9706-9778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9706-9778 bp Feature: gene Location: 9975-10286 bp Feature: domain Description: PRK10173 Location: 9978-10197 bp Feature: domain Description: PRK10173 Location: 9978-10197 bp Feature: gene Location: 10270-10719 bp Feature: domain Description: PRK10173 Location: 10273-10711 bp Feature: domain Description: PRK10173 Location: 10273-10711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII