myRT

myRT report for GCA_003075415.1_ASM307541v1

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Seq: QDAH01000033.1 Microvirga sp. KLBC 81 81_scaffold33, whole genome shotgun sequence (63221 bp)
Overview 1 RT 1: 38312-50565 bp Neighborhood of RT #1 [38312, 50565] FtsK dnd_rel_methyl dnd_rel_methyl RVT-UG5 STE14 Feature: gene Location: 38312-43669 bp Feature: domain Description: FtsK Location: 42908-43514 bp Feature: domain Description: FtsK Location: 42908-4351 4 bp Feature: gene Location: 43798-45747 bp Feature: domain Description: dnd_rel_methyl Location: 43816-44269 bp Feature: domain Description: dnd_rel_methyl Location: 4381 6-44269 bp Feature: domain Description: dnd_rel_methyl Location: 44299-45679 bp Feature: domain Description: dnd_rel_methyl Location: 44299-45679 bp Feature: gene Location: 46198-49374 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 46741-47245 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 46741 -47245 bp Feature: gene Location: 49677-49922 bp Feature: domain Description: STE14 Location: 49686-49800 bp Feature: domain Description: STE1 4 Location: 49686-49800 bp Feature: gene Location: 49996-50565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), dnd_rel_methyl (TIGR04096), RVT-UG5, STE14 (COG2020)

Seq: QDAH01000039.1 Microvirga sp. KLBC 81 81_scaffold39, whole genome shotgun sequence (54308 bp)
Overview 1 RT 1: 6371-10332 bp Neighborhood of RT #1 [6371, 10332] COG3547 RVT_N RVT-GII Feature: gene Location: 6371-7402 bp Feature: domain Description: COG3547 Location: 6494-7349 bp Feature: domain Description: COG3547 Location: 6494-7349 bp Feature: gene Location: 7434-8333 bp Feature: gene Location: 8145-9305 bp Feature: domain Description: RVT_N Location: 8208-8451 bp Feature: domain Description: RVT_N Location: 82 08-8451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8496-8796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8496-8796 bp Feature: gene Location: 9729-10151 bp Feature: gene Location: 10195-10332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT_N (pfam13655), RVT-GII

Seq: QDAH01000096.1 Microvirga sp. KLBC 81 81_scaffold96, whole genome shotgun sequence (16184 bp)
Overview 1 RT 1: 11558-16156 bp Neighborhood of RT #1 [11558, 16182] PHA02517 RVT-GII GIIM DEDD_Tnp_IS110 Feature: gene Location: 11558-12415 bp Feature: domain Description: PHA02517 Location: 11624-12404 bp Feature: domain Description: PHA02517 Location: 11624-12404 bp Feature: gene Location: 13469-13975 bp Feature: gene Location: 14200-15522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14488-15139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14488-1513 9 bp Feature: domain Description: GIIM Note: maturase Location: 15211-15319 bp Feature: domain Description: GIIM Note: maturase Location: 15211-153 19 bp Feature: gene Location: 15712-16182 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 15727-16156 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 15727-16156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548)

Seq: QDAH01000098.1 Microvirga sp. KLBC 81 81_scaffold98, whole genome shotgun sequence (15763 bp)
Overview 1 RT 1: 2802-6399 bp Neighborhood of RT #1 [2802, 6399] Zn_ribbon_recom group_II_RT_mat RVT-GII GIIM Feature: gene Location: 2802-4019 bp Feature: domain Description: Zn_ribbon_recom Location: 2931-3072 bp Feature: domain Description: Zn_ribbon_recom Location: 2931-3072 bp Feature: gene Location: 4216-4524 bp Feature: gene Location: 4569-5447 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4575-4728 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4 575-4 728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4989-5136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 989-5136 bp Feature: domain Description: GIIM Note: maturase Location: 5193-5424 bp Feature: domain Description: GIIM Note: maturase Location: 5193-54 24 bp Feature: gene Location: 5765-5974 bp Feature: gene Location: 6022-6399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_ribbon_recom (pfam13408), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: QDAH01000158.1 Microvirga sp. KLBC 81 81_scaffold158, whole genome shotgun sequence (5788 bp)
Overview 1 RT 1: 2641-5785 bp Neighborhood of RT #1 [2641, 5785] IstB_IS21_ATP IstB_IS21 COG4584 RVT-GII KOG4768 Feature: gene Location: 2641-3384 bp Feature: domain Description: IstB_IS21_ATP Location: 2719-2797 bp Feature: domain Description: IstB_IS21_ATP Location: 2719-2797 bp Feature: domain Description: IstB_IS21 Location: 2800-3328 bp Feature: domain Description: IstB_IS21 Location: 2800-3328 bp Feature: gene Location: 3399-4214 bp Feature: domain Description: COG4584 Location: 3630-4038 bp Feature: domain Description: COG45 84 Location: 3630-4038 bp Feature: gene Location: 4229-5161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4280-4640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4280-4640 bp Feature: domain Description: KOG4768 Location: 4778-4937 bp Feature: domain Description: KOG4768 Location: 4778-4937 bp Feature: gene Location: 5492-5785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )