myRT

myRT report for GCA_003076195.1_ASM307619v1

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Seq: QDKD01000041.1 Escherichia coli strain JEONG-9603 NODE_68_length_24649_cov_22.2122_ID_135, whole genome shotgun sequence (24649 bp)
Overview 1 RT 1: 11861-16297 bp Neighborhood of RT #1 [11861, 16305] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 11861-12238 bp Feature: domain Description: DDE_Tnp_IS1 Location: 11864-12236 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 1 864-1 2236 bp Feature: gene Location: 12283-12558 bp Feature: domain Description: InsA Location: 12286-12550 bp Feature: domain Description: InsA Location: 1 2286-1 2550 bp Feature: gene Location: 12710-14197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13115-13805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 1 5-1 3805 bp Feature: gene Location: 14351-15034 bp Feature: domain Description: PRK10276 Location: 14654-15017 bp Feature: domain Description: PRK1 0276 Location: 1 4654-1 501 7 bp Feature: gene Location: 15034-16305 bp Feature: domain Description: umuC Location: 15037-16297 bp Feature: domain Description: umuC Location: 1 5037-1 6297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: QDKD01000143.1 Escherichia coli strain JEONG-9603 NODE_36_length_47565_cov_14.5008_ID_71, whole genome shotgun sequence (47565 bp)
Overview 1 RT 1: 9521-13403 bp Neighborhood of RT #1 [9521, 13408] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 9521-9979 bp Feature: domain Description: dut Location: 9527-9974 bp Feature: domain Description: dut Location: 952 7-9974 bp Feature: gene Location: 10086-10682 bp Feature: domain Description: slmA Location: 10092-10668 bp Feature: domain Description: slmA Location: 10092 -10668 bp Feature: gene Location: 10728-11687 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10863-11412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10863-11412 bp Feature: gene Location: 11985-12641 bp Feature: domain Description: pyrE Location: 12003-12636 bp Feature: domain Description: pyrE Location: 12 003-12 636 bp Feature: gene Location: 12692-13408 bp Feature: domain Description: rph Location: 12695-13403 bp Feature: domain Description: rph Location: 12 695-13403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), dut (TIGR00576)