myRT

myRT report for GCA_003077455.1_ASM307745v1

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Seq: QDLX01000003.1 Salmonella enterica subsp. enterica serovar Oranienburg strain 228 NODE_3_length_444439_cov_15.6506, whole genome shotgun sequence (444439 bp)
Overview 1 RT 1: 197810-203716 bp Neighborhood of RT #1 [197810, 203716] HTH_36 RVT-AbiP2 DUF4062 Feature: gene Location: 197810-198265 bp Feature: gene Location: 199145-199654 bp Feature: domain Description: HTH_36 Location: 199331-199475 bp Feature: domain Description: HTH_36 Location: 1 99331 -1 99475 bp Feature: gene Location: 199862-201361 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 200294-200750 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 200294-200750 bp Feature: gene Location: 201760-203097 bp Feature: domain Description: DUF4062 Location: 201793-202036 bp Feature: domain Description: DUF4062 Location: 201 793-202036 bp Feature: gene Location: 203135-203716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-AbiP2, DUF4062 (pfam13271)

Seq: QDLX01000015.1 Salmonella enterica subsp. enterica serovar Oranienburg strain 228 NODE_15_length_82726_cov_19.7491, whole genome shotgun sequence (82726 bp)
Overview 1 RT 1: 31681-37125 bp Neighborhood of RT #1 [31681, 37133] PRK09692 RVT-Retrons PRK10473 Feature: gene Location: 31681-32823 bp Feature: domain Description: PRK09692 Location: 31702-32761 bp Feature: domain Description: PRK09692 Location: 31702 -32 761 bp Feature: gene Location: 33148-34110 bp Feature: gene Location: 34110-35045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34221-34806 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 342 2 1-34806 bp Feature: gene Location: 35303-35431 bp Feature: gene Location: 35946-37133 bp Feature: domain Description: PRK10473 Location: 35949-37125 bp Feature: domain Description: PRK10473 Location: 35949-3712 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)