myRT

myRT report for GCA_003095475.1_ASM309547v1

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Seq: QEFV01000269.1 Klebsiella pneumoniae strain LIM1738 NODE_299_length_1825_cov_113.758354, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 60-1913 bp Neighborhood of RT #1 [60, 1913] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1 1 55 bp Feature: gene Location: 1701-1913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QEFV01000664.1 Klebsiella pneumoniae strain LIM1738 NODE_724_length_20798_cov_15.834984, whole genome shotgun sequence (20888 bp)
Overview 1 RT 1: 104-5486 bp Neighborhood of RT #1 [104, 5503] RVT-UG4 FimD FimC Feature: gene Location: 104-2134 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 512-956 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 512 -956 bp Feature: gene Location: 2134-4743 bp Feature: domain Description: FimD Location: 2191-4732 bp Feature: domain Description: FimD Location: 2 191-4732 bp Feature: gene Location: 4775-5503 bp Feature: domain Description: FimC Location: 4823-5486 bp Feature: domain Description: FimC Location: 482 3-5486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: QEFV01000832.1 Klebsiella pneumoniae strain LIM1738 NODE_926_length_1566_cov_12.771392, whole genome shotgun sequence (1656 bp)
Overview 1 RT 1: 3-1479 bp Neighborhood of RT #1 [3, 1655] RVT-Retrons Feature: gene Location: 3-650 bp Feature: gene Location: 765-1655 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 945-1479 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 945-1479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons