myRT

myRT report for GCA_003095555.1_ASM309555v1

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Seq: QEFY01000697.1 Klebsiella pneumoniae strain LIM1198 NODE_776_length_1140_cov_55.678947, whole genome shotgun sequence (1230 bp)
Overview 1 RT 1: 1-778 bp Neighborhood of RT #1 [1, 1170] RVT-GII Feature: gene Location: 1-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QEFY01002632.1 Klebsiella pneumoniae strain LIM1198 NODE_2878_length_2186_cov_102.795975, whole genome shotgun sequence (2276 bp)
Overview 1 RT 1: 2-1939 bp Neighborhood of RT #1 [2, 2184] RVT-GII GIIM Feature: gene Location: 2-367 bp Feature: gene Location: 661-2184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 934-1666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 934-1666 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1939 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QEFY01002636.1 Klebsiella pneumoniae strain LIM1198 NODE_2883_length_5954_cov_8.806517, whole genome shotgun sequence (6044 bp)
Overview 1 RT 1: 718-3793 bp Neighborhood of RT #1 [718, 3798] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 718-936 bp Feature: domain Description: PRK09678 Location: 721-919 bp Feature: domain Description: PRK09678 Location: 721-919 bp Feature: gene Location: 1183-1371 bp Feature: gene Location: 1340-2113 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1475-1928 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1475-1928 bp Feature: gene Location: 2729-3211 bp Feature: domain Description: SmpB Location: 2759-3203 bp Feature: domain Description: SmpB Location: 2759-3 203 bp Feature: gene Location: 3322-3798 bp Feature: domain Description: PRK10724 Location: 3328-3793 bp Feature: domain Description: PRK10724 Location: 3 3 28-3 793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)