myRT

myRT report for GCA_003096135.1_ASM309613v1

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Seq: QENS01000031.1 Vibrio cholerae strain 9507 1817, whole genome shotgun sequence (55494 bp)
Overview 1 RT 1: 20922-28602 bp Neighborhood of RT #1 [20922, 28625] TIGR02646 COG3950 RVT-Retrons PRK05658 DnaG Feature: gene Location: 20922-21566 bp Feature: domain Description: TIGR02646 Location: 20988-21396 bp Feature: domain Description: TIGR02646 Location: 20988-21 396 bp Feature: gene Location: 21563-23245 bp Feature: domain Description: COG3950 Location: 21779-23138 bp Feature: domain Description: COG3950 Location: 21 779-231 38 bp Feature: gene Location: 23238-24179 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23340-23940 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 23340-23940 bp Feature: gene Location: 24886-26763 bp Feature: domain Description: PRK05658 Location: 24892-26761 bp Feature: domain Description: PRK05658 Location: 24892-26761 bp Feature: gene Location: 26862-28625 bp Feature: domain Description: DnaG Location: 26877-28602 bp Feature: domain Description: DnaG Location: 26877-28602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PRK05658 (RNA polymerase sigma factor RpoD; Validated), DnaG (COG0358)

Seq: QENS01000057.1 Vibrio cholerae strain 9507 1846, whole genome shotgun sequence (360265 bp)
Overview 1 RT 1: 136409-144629 bp Neighborhood of RT #1 [136409, 144629] Phage_int_SAM_5 INT_ICEBs1_C_like RVT-UG8 RVT-UG3 Feature: gene Location: 136409-137923 bp Feature: gene Location: 138090-139202 bp Feature: domain Description: Phage_int_SAM_5 Location: 138294-138405 bp Feature: domain Description: Phage_int_SAM_5 Location: 1382 94-138405 bp Feature: domain Description: INT_ICEBs1_C_like Location: 138456-139005 bp Feature: domain Description: INT_ICEBs1_C_like Location: 138456-139005 bp Feature: gene Location: 140141-141568 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 140144-140552 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 140144-140552 bp Feature: gene Location: 142298-143536 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 142586-143069 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 142 586-143069 bp Feature: gene Location: 144034-144231 bp Feature: gene Location: 144246-144629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INT_ICEBs1_C_like (cd01189), RVT-UG8, RVT-UG3