myRT

myRT report for GCA_003096715.1_ASM309671v1

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Seq: QEOL01000001.1 Paraburkholderia silvatlantica strain PSCR-88 Ga0215861_101, whole genome shotgun sequence (469692 bp)
Overview 1 RT 1: 327957-332744 bp Neighborhood of RT #1 [327957, 333184] InsE RVT-GII GIIM PHA02517 TIGR03607 TIGR03607 Feature: gene Location: 327957-328247 bp Feature: domain Description: InsE Location: 327972-328230 bp Feature: domain Description: InsE Location: 327972-328230 bp Feature: gene Location: 328608-328757 bp Feature: gene Location: 328759-330006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328963-329620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328963-329620 bp Feature: domain Description: GIIM Note: maturase Location: 329701-329920 bp Feature: domain Description: GIIM Note: maturase Location: 329701 -329920 bp Feature: gene Location: 330148-330990 bp Feature: domain Description: PHA02517 Location: 330166-330973 bp Feature: domain Description: PHA0251 7 Location: 3301 66-330973 bp Feature: gene Location: 331349-333184 bp Feature: domain Description: TIGR03607 Location: 331607-332456 bp Feature: domain Description: TIGR03607 Location: 331 607-332456 bp Feature: domain Description: TIGR03607 Location: 332645-332744 bp Feature: domain Description: TIGR03607 Location: 332645-332744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), TIGR03607 (patatin-related protein)

Seq: QEOL01000007.1 Paraburkholderia silvatlantica strain PSCR-88 Ga0215861_107, whole genome shotgun sequence (270932 bp)
Overview 1 RT 1: 122631-127797 bp Neighborhood of RT #1 [122631, 127797] Avd_like RVT-DGRs Dcm Feature: gene Location: 122631-122999 bp Feature: gene Location: 123014-123298 bp Feature: domain Description: Avd_like Location: 123041-123287 bp Feature: domain Description: Avd_like Location: 12 3041-12 32 87 bp Feature: gene Location: 123382-124728 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 123805-124492 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 3805-12 4492 bp Feature: gene Location: 124733-126556 bp Feature: domain Description: Dcm Location: 124769-126506 bp Feature: domain Description: Dcm Location: 12 4769-12 6506 bp Feature: gene Location: 126577-127797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)

Seq: QEOL01000017.1 Paraburkholderia silvatlantica strain PSCR-88 Ga0215861_117, whole genome shotgun sequence (181291 bp)
Overview 1 RT 1: 132667-136249 bp Neighborhood of RT #1 [132667, 136249] ETR_like LysR RVT-GII GIIM Feature: gene Location: 132667-133665 bp Feature: domain Description: ETR_like Location: 132691-133657 bp Feature: domain Description: ETR_like Location: 13 2691-13 3 657 bp Feature: gene Location: 133797-134699 bp Feature: domain Description: LysR Location: 133806-134679 bp Feature: domain Description: LysR Location: 13 3 806-13 4679 bp Feature: gene Location: 134992-135531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135037-135151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 503 7-13 5151 bp Feature: domain Description: GIIM Note: maturase Location: 135226-135448 bp Feature: domain Description: GIIM Note: maturase Location: 13 5226-13 5448 bp Feature: gene Location: 135716-136153 bp Feature: gene Location: 136016-136249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ETR_like (cd05282), LysR (COG0583), RVT-GII, GIIM (pfam08388)

Seq: QEOL01000027.1 Paraburkholderia silvatlantica strain PSCR-88 Ga0215861_127, whole genome shotgun sequence (136129 bp)
Overview 1 RT 1: 105971-111954 bp Neighborhood of RT #1 [105971, 112295] RVT-Retrons Trypsin_2 AbiTii Feature: gene Location: 105971-107581 bp Feature: gene Location: 108425-108640 bp Feature: gene Location: 108746-110572 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108899-109508 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108899-109508 bp Feature: domain Description: Trypsin_2 Location: 109979-110447 bp Feature: domain Description: Trypsin_2 Location: 109979-1104 4 7 bp Feature: gene Location: 111025-111273 bp Feature: gene Location: 111393-112295 bp Feature: domain Description: AbiTii Location: 111405-111954 bp Feature: domain Description: AbiTii Location: 1114 05-111954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), AbiTii (pfam18864)

Seq: QEOL01000062.1 Paraburkholderia silvatlantica strain PSCR-88 Ga0215861_162, whole genome shotgun sequence (2249 bp)
Overview 1 RT 1: 1-1909 bp Neighborhood of RT #1 [1, 2091] RVT_N RVT-GII GIIM Feature: gene Location: 1-273 bp Feature: gene Location: 619-2091 bp Feature: RT Description: RVT_N Location: 694-937 bp Feature: RT Description: RVT_N Location: 694-937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1624 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1909 bp Feature: domain Description: GIIM Note: maturase Location: 1675 -1909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QEOL01000063.1 Paraburkholderia silvatlantica strain PSCR-88 Ga0215861_163, whole genome shotgun sequence (1887 bp)
Overview 1 RT 1: 78-1698 bp Neighborhood of RT #1 [78, 1698] RVT-GII GIIM Feature: gene Location: 78-1325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-942 bp Feature: domain Description: GIIM Note: maturase Location: 1023-1236 bp Feature: domain Description: GIIM Note: maturase Location: 1023-1236 bp Feature: gene Location: 1324-1698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)