myRT

myRT report for GCA_003096875.1_ASM309687v1

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Seq: QEOB01000001.1 Paraburkholderia unamae strain SCZa-39 Ga0215850_101, whole genome shotgun sequence (892865 bp)
Overview 1 RT 1: 710959-718546 bp Neighborhood of RT #1 [710959, 718581] PRK05731 PRK12861 RVT_N RVT-GII GIIM HNHc COG4290 Barstar Feature: gene Location: 710959-711960 bp Feature: domain Description: PRK05731 Location: 710965-711949 bp Feature: domain Description: PRK05731 Location: 71 0965-71 1 949 bp Feature: gene Location: 712125-714419 bp Feature: domain Description: PRK12861 Location: 712143-714414 bp Feature: domain Description: PRK1 2861 Location: 71 21 43-71 441 4 bp Feature: gene Location: 715802-717406 bp Feature: RT Description: RVT_N Location: 715805-716003 bp Feature: RT Description: RVT_N Location: 71 5805-71 6003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 716048-716696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 6048-71 6696 bp Feature: domain Description: GIIM Note: maturase Location: 716747-716981 bp Feature: domain Description: GIIM Note: maturase Location: 71 6747-71 6981 bp Feature: domain Description: HNHc Note: nucleases Location: 717197-717365 bp Feature: domain Description: HNHc Note: nucleases Location: 71 71 97-71 7365 bp Feature: gene Location: 717642-718016 bp Feature: domain Description: COG4290 Location: 717663-718008 bp Feature: domain Description: COG4290 Location: 71 7663-71 8008 bp Feature: gene Location: 718033-718581 bp Feature: domain Description: Barstar Location: 718300-718546 bp Feature: domain Description: Barstar Location: 71 8300-71 8546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05731 (thiamine monophosphate kinase; Provisional), PRK12861 (malic enzyme; Reviewed), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG4290 (Guanyl-specific ribonuclease Sa ), Barstar (pfam01337)

Seq: QEOB01000009.1 Paraburkholderia unamae strain SCZa-39 Ga0215850_109, whole genome shotgun sequence (385146 bp)
Overview 1 RT 1: 296185-303134 bp Neighborhood of RT #1 [296185, 303134] ALDH_AAS00426 PRK01250 RVT-Retrons PRK03918 DUF3732 Feature: gene Location: 296185-297624 bp Feature: domain Description: ALDH_AAS00426 Location: 296257-297613 bp Feature: domain Description: ALDH_AAS0042 6 Location: 2 962 57-2 97613 bp Feature: gene Location: 297950-298477 bp Feature: domain Description: PRK01250 Location: 297953-298475 bp Feature: domain Description: PRK012 50 Location: 2 97953-2 98475 bp Feature: gene Location: 299416-300810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 299431-299779 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 99431-2 99779 bp Feature: gene Location: 300940-302787 bp Feature: domain Description: PRK03918 Location: 301693-301900 bp Feature: domain Description: PRK03918 Location: 301693-301900 bp Feature: domain Description: DUF3732 Location: 302212-302749 bp Feature: domain Description: DUF3732 Location: 302 2 12 -302 749 bp Feature: gene Location: 302916-303134 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_AAS00426 (cd07109), PRK01250 (inorganic diphosphatase), RVT-Retrons, PRK03918 (DNA double-strand break repair ATPase Rad50), DUF3732 (pfam12532)

Seq: QEOB01000042.1 Paraburkholderia unamae strain SCZa-39 Ga0215850_142, whole genome shotgun sequence (59047 bp)
Overview 1 RT 1: 54301-59044 bp Neighborhood of RT #1 [54301, 59044] DUF1566 Avd_like RVT-DGRs Dcm Feature: gene Location: 54301-54786 bp Feature: domain Description: DUF1566 Location: 54559-54763 bp Feature: domain Description: DUF1566 Location: 54559-54763 bp Feature: gene Location: 54801-55175 bp Feature: domain Description: Avd_like Location: 54828-55134 bp Feature: domain Description: Avd_like Location: 54828-5513 4 bp Feature: gene Location: 55221-56504 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55590-56277 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55590-56277 bp Feature: gene Location: 56730-58571 bp Feature: domain Description: Dcm Location: 56787-58521 bp Feature: domain Description: Dcm Location: 56787-58521 bp Feature: gene Location: 58583-59044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Dcm (COG0270)