myRT

myRT report for GCA_003111805.2_ASM311180v2

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Seq: CP029216.1 Klebsiella pneumoniae strain L201 chromosome (4943800 bp)
Overview 1 RT 1: 1204670-1207919 bp 2 RT 2: 1212191-1217950 bp 3 RT 3: 1531897-1538189 bp 4 RT 4: 1606910-1611018 bp 5 RT 5: 1757533-1763410 bp 6 RT 6: 1836825-1843561 bp 7 RT 7: 2225097-2230222 bp 8 RT 8: 3103287-3108168 bp 9 RT 9: 3714988-3719024 bp Neighborhood of RT #1 [1204670, 1208311] YbjK int RVT-GII Neighborhood of RT #2 [1212191, 1217955] dam Phage_GPA RVT-GII DinI Neighborhood of RT #3 [1531897, 1538189] HTH_28 rve PRK05318 RVT-GII PRK10597 Neighborhood of RT #4 [1606910, 1611020] DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1757533, 1763412] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #6 [1836825, 1843566] Laminin_G_3 RVT-GII PRK10597 Neighborhood of RT #7 [2225097, 2230416] RVT-GII PRK10276 Neighborhood of RT #8 [3103287, 3108173] YccC PRK10016 RVT-GII dacD Neighborhood of RT #9 [3714988, 3719878] DinI RVT-GII Phage_GPA Feature: gene Location: 1204670-1205233 bp Feature: domain Description: YbjK Location: 1204676-1205213 bp Feature: domain Description: YbjK Location: 1 204676-1 20521 3 bp Feature: gene Location: 1205356-1206408 bp Feature: domain Description: int Location: 1205359-1206358 bp Feature: domain Description: int Location: 1 205359-1 206358 bp Feature: gene Location: 1206824-1208311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1207229-1207919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 207229-1 20791 9 bp Feature: gene Location: 1212191-1213048 bp Feature: domain Description: dam Location: 1212194-1212971 bp Feature: domain Description: dam Location: 1 21 21 94-1 21 2971 bp Feature: gene Location: 1213045-1215459 bp Feature: domain Description: Phage_GPA Location: 1213609-1214575 bp Feature: domain Description: Phage_GPA Location: 1 21 3609-1 21 4575 bp Feature: gene Location: 1215935-1217422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1216340-1217030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 6340-1 21 7030 bp Feature: gene Location: 1217523-1217711 bp Feature: gene Location: 1217722-1217955 bp Feature: domain Description: DinI Location: 1217764-1217950 bp Feature: domain Description: DinI Location: 1 21 7764-1 21 7950 bp Feature: gene Location: 1531897-1532943 bp Feature: domain Description: HTH_28 Location: 1532020-1532140 bp Feature: domain Description: HTH_28 Location: 1 532020-1 5321 40 bp Feature: domain Description: rve Location: 1532428-1532758 bp Feature: domain Description: rve Location: 1 532428-1 532758 bp Feature: gene Location: 1533889-1535250 bp Feature: domain Description: PRK05318 Location: 1533913-1535212 bp Feature: domain Description: PRK0531 8 Location: 1 53391 3-1 53521 2 bp Feature: gene Location: 1536088-1537575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1536493-1537183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 536493-1 5371 83 bp Feature: gene Location: 1537654-1537887 bp Feature: domain Description: PRK10597 Location: 1537657-1537882 bp Feature: domain Description: PRK1 0597 Location: 1 537657-1 537882 bp Feature: gene Location: 1537932-1538189 bp Feature: gene Location: 1606910-1607152 bp Feature: domain Description: DinI Location: 1606961-1607141 bp Feature: domain Description: DinI Location: 1 606961 -1 6071 41 bp Feature: gene Location: 1607167-1607313 bp Feature: gene Location: 1607767-1609254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1608172-1608862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6081 72-1 608862 bp Feature: gene Location: 1609333-1609752 bp Feature: domain Description: PRK10276 Location: 1609336-1609747 bp Feature: domain Description: PRK1 0276 Location: 1 609336-1 609747 bp Feature: gene Location: 1609755-1611020 bp Feature: domain Description: umuC Location: 1609758-1611018 bp Feature: domain Description: umuC Location: 1 609758-1 61 1 01 8 bp Feature: gene Location: 1757533-1758249 bp Feature: domain Description: Rve Location: 1757548-1758193 bp Feature: domain Description: Rve Location: 1 757548-1 7581 93 bp Feature: gene Location: 1758255-1758764 bp Feature: domain Description: PinE Location: 1758303-1758756 bp Feature: domain Description: PinE Location: 1 758303-1 758756 bp Feature: gene Location: 1760159-1761646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1760564-1761254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 760564-1 761 254 bp Feature: gene Location: 1761726-1762145 bp Feature: domain Description: PRK10276 Location: 1761729-1762140 bp Feature: domain Description: PRK1 0276 Location: 1 761 729-1 7621 40 bp Feature: gene Location: 1762147-1763412 bp Feature: domain Description: umuC Location: 1762150-1763410 bp Feature: domain Description: umuC Location: 1 7621 50-1 76341 0 bp Feature: gene Location: 1836825-1839848 bp Feature: gene Location: 1839859-1840590 bp Feature: domain Description: Laminin_G_3 Location: 1840195-1840534 bp Feature: domain Description: Laminin_G_3 Location: 1 8401 95-1 840534 bp Feature: gene Location: 1841246-1842733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1841651-1842341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 841 651 -1 842341 bp Feature: gene Location: 1842793-1843002 bp Feature: gene Location: 1843318-1843566 bp Feature: domain Description: PRK10597 Location: 1843321-1843561 bp Feature: domain Description: PRK1 0597 Location: 1 843321 -1 843561 bp Feature: gene Location: 2225097-2227067 bp Feature: gene Location: 2227070-2227837 bp Feature: gene Location: 2228295-2229782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2228700-2229390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2228700-2229390 bp Feature: gene Location: 2229872-2230051 bp Feature: gene Location: 2230099-2230416 bp Feature: domain Description: PRK10276 Location: 2230105-2230222 bp Feature: domain Description: PRK1 0276 Location: 22301 05-2230222 bp Feature: gene Location: 3103287-3104345 bp Feature: domain Description: YccC Location: 3103293-3104331 bp Feature: domain Description: YccC Location: 31 03293-31 04331 bp Feature: gene Location: 3104444-3104917 bp Feature: domain Description: PRK10016 Location: 3104447-3104906 bp Feature: domain Description: PRK1 001 6 Location: 31 04447-31 04906 bp Feature: gene Location: 3104999-3106483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3105401-3106091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 05401 -31 06091 bp Feature: gene Location: 3106492-3106659 bp Feature: gene Location: 3107004-3108173 bp Feature: domain Description: dacD Location: 3107013-3108168 bp Feature: domain Description: dacD Location: 31 0701 3-31 081 68 bp Feature: gene Location: 3714988-3715221 bp Feature: domain Description: DinI Location: 3715033-3715216 bp Feature: domain Description: DinI Location: 371 5033-371 521 6 bp Feature: gene Location: 3715233-3715421 bp Feature: gene Location: 3715529-3717013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3715931-3716621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 5931 -371 6621 bp Feature: gene Location: 3717022-3717189 bp Feature: gene Location: 3717494-3719878 bp Feature: domain Description: Phage_GPA Location: 3718058-3719024 bp Feature: domain Description: Phage_GPA Location: 371 8058-371 9024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183), HTH_28 (pfam13518), rve (pfam00665), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional)
PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961), Laminin_G_3 (pfam13385), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)

Seq: CP029218.2 Klebsiella pneumoniae strain L201 plasmid p3-L201, complete sequence (177991 bp)
Overview 1 RT 1: 161620-165481 bp Neighborhood of RT #1 [161620, 165481] HHA RVT-GII INT_Cre_C Feature: gene Location: 161620-161871 bp Feature: domain Description: HHA Location: 161668-161851 bp Feature: domain Description: HHA Location: 161668-161851 bp Feature: gene Location: 161906-162364 bp Feature: gene Location: 162389-163876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162794-163484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 794-163484 bp Feature: gene Location: 163962-165098 bp Feature: domain Description: INT_Cre_C Location: 164385-165039 bp Feature: domain Description: INT_Cre_C Location: 164385-165039 bp Feature: gene Location: 165164-165481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP029219.1 Klebsiella pneumoniae strain L201 plasmid pKPC-L201 (128737 bp)
Overview 1 RT 1: 24835-29024 bp 2 RT 2: 103125-106565 bp Neighborhood of RT #1 [24835, 29024] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Neighborhood of RT #2 [103125, 106565] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 24835-25506 bp Feature: domain Description: Plasmid_stab_B Location: 24850-25057 bp Feature: domain Description: Plasmid_stab_B Location: 24850-25057 bp Feature: domain Description: Plasmid_stab_B Location: 25162-25369 bp Feature: domain Description: Plasmid_stab_B Location: 25162-253 69 bp Feature: gene Location: 25509-26480 bp Feature: domain Description: StbA Location: 25512-26457 bp Feature: domain Description: StbA Location: 25512-26457 bp Feature: gene Location: 26729-28216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27134-27824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2713 4-27824 bp Feature: gene Location: 28222-28389 bp Feature: gene Location: 28629-29024 bp Feature: gene Location: 103125-103547 bp Feature: domain Description: DUF1380 Location: 103128-103422 bp Feature: domain Description: DUF13 80 Location: 103 128-103 422 bp Feature: gene Location: 103544-103735 bp Feature: gene Location: 104049-105716 bp Feature: RT Description: RVT_N Location: 104097-104334 bp Feature: RT Description: RVT_N Location: 104097-1043 3 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104385-105027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043 85-105027 bp Feature: domain Description: GIIM Note: maturase Location: 105078-105312 bp Feature: domain Description: GIIM Note: maturase Location: 105078-1053 12 bp Feature: domain Description: HNHc Note: nucleases Location: 105522-105681 bp Feature: domain Description: HNHc Note: nucleases Location: 105522-105681 bp Feature: gene Location: 105996-106178 bp Feature: gene Location: 106290-106565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, DUF1380 (pfam07128), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507)