myRT

myRT report for GCA_003111885.2_ASM311188v2

Download annotations/find similar RTs

Seq: CP029226.1 Klebsiella pneumoniae strain L491 chromosome (5525009 bp)
Overview 1 RT 1: 1804569-1810302 bp 2 RT 2: 2415321-2421792 bp 3 RT 3: 3294676-3298022 bp 4 RT 4: 3681526-3685177 bp 5 RT 5: 3761680-3766829 bp 6 RT 6: 3914072-3917925 bp 7 RT 7: 3986470-3991165 bp 8 RT 8: 4306955-4310981 bp 9 RT 9: 4316599-4319504 bp Neighborhood of RT #1 [1804569, 1810307] dam Phage_GPA RVT-GII DinI Neighborhood of RT #2 [2415321, 2421806] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #3 [3294676, 3298022] PRK10276 RVT-GII Neighborhood of RT #4 [3681526, 3685233] PRK10597 RVT-GII Laminin_G_3 Neighborhood of RT #5 [3761680, 3766837] umuC PRK10276 RVT-GII PinE Neighborhood of RT #6 [3914072, 3917925] umuC PRK10276 RVT-GII Neighborhood of RT #7 [3986470, 3991203] LexA_DNA_bind PRK10597 RVT-GII PRK05318 Neighborhood of RT #8 [4306955, 4311865] DinI RVT-GII Phage_GPA Neighborhood of RT #9 [4316599, 4319554] RVT-GII int Feature: gene Location: 1804569-1805420 bp Feature: domain Description: dam Location: 1804572-1805343 bp Feature: domain Description: dam Location: 1 804572-1 805343 bp Feature: gene Location: 1805417-1807801 bp Feature: domain Description: Phage_GPA Location: 1805981-1806947 bp Feature: domain Description: Phage_GPA Location: 1 805981 -1 806947 bp Feature: gene Location: 1808279-1809766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1808684-1809374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 808684-1 809374 bp Feature: gene Location: 1809874-1810062 bp Feature: gene Location: 1810074-1810307 bp Feature: domain Description: DinI Location: 1810119-1810302 bp Feature: domain Description: DinI Location: 1 81 01 1 9-1 81 0302 bp Feature: gene Location: 2415321-2416745 bp Feature: domain Description: SbcB Location: 2415327-2416743 bp Feature: domain Description: SbcB Location: 241 5327-241 6743 bp Feature: gene Location: 2416920-2418089 bp Feature: domain Description: dacD Location: 2416929-2418084 bp Feature: domain Description: dacD Location: 241 6929-241 8084 bp Feature: gene Location: 2418607-2420094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2419012-2419702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 901 2-241 9702 bp Feature: gene Location: 2420176-2420649 bp Feature: domain Description: PRK10016 Location: 2420179-2420638 bp Feature: domain Description: PRK1 001 6 Location: 24201 79-2420638 bp Feature: gene Location: 2420733-2421806 bp Feature: domain Description: YccC Location: 2420754-2421792 bp Feature: domain Description: YccC Location: 2420754-2421 792 bp Feature: gene Location: 3294676-3294993 bp Feature: domain Description: PRK10276 Location: 3294682-3294799 bp Feature: domain Description: PRK1 0276 Location: 3294682-3294799 bp Feature: gene Location: 3295041-3295220 bp Feature: gene Location: 3295310-3296794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3295712-3296402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329571 2-3296402 bp Feature: gene Location: 3296803-3296970 bp Feature: gene Location: 3297255-3298022 bp Feature: gene Location: 3681526-3681774 bp Feature: domain Description: PRK10597 Location: 3681529-3681769 bp Feature: domain Description: PRK1 0597 Location: 3681 529-3681 769 bp Feature: gene Location: 3682090-3682299 bp Feature: gene Location: 3682359-3683843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3682761-3683451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3682761 -3683451 bp Feature: gene Location: 3683852-3684019 bp Feature: gene Location: 3684502-3685233 bp Feature: domain Description: Laminin_G_3 Location: 3684838-3685177 bp Feature: domain Description: Laminin_G_3 Location: 3684838-36851 77 bp Feature: gene Location: 3761680-3762945 bp Feature: domain Description: umuC Location: 3761683-3762943 bp Feature: domain Description: umuC Location: 3761 683-3762943 bp Feature: gene Location: 3762947-3763366 bp Feature: domain Description: PRK10276 Location: 3762950-3763361 bp Feature: domain Description: PRK1 0276 Location: 3762950-3763361 bp Feature: gene Location: 3763446-3764930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3763848-3764538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3763848-3764538 bp Feature: gene Location: 3764939-3765106 bp Feature: gene Location: 3766328-3766837 bp Feature: domain Description: PinE Location: 3766376-3766829 bp Feature: domain Description: PinE Location: 3766376-3766829 bp Feature: gene Location: 3914072-3915337 bp Feature: domain Description: umuC Location: 3914075-3915335 bp Feature: domain Description: umuC Location: 391 4075-391 5335 bp Feature: gene Location: 3915340-3915759 bp Feature: domain Description: PRK10276 Location: 3915343-3915754 bp Feature: domain Description: PRK1 0276 Location: 391 5343-391 5754 bp Feature: gene Location: 3915838-3917322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3916240-3916930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 6240-391 6930 bp Feature: gene Location: 3917331-3917498 bp Feature: gene Location: 3917779-3917925 bp Feature: gene Location: 3986470-3986862 bp Feature: domain Description: LexA_DNA_bind Location: 3986548-3986737 bp Feature: domain Description: LexA_DNA_bind Location: 3986548-3986737 bp Feature: gene Location: 3987205-3987438 bp Feature: domain Description: PRK10597 Location: 3987208-3987433 bp Feature: domain Description: PRK1 0597 Location: 3987208-3987433 bp Feature: gene Location: 3987517-3989001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3987919-3988609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398791 9-3988609 bp Feature: gene Location: 3989010-3989177 bp Feature: gene Location: 3989842-3991203 bp Feature: domain Description: PRK05318 Location: 3989866-3991165 bp Feature: domain Description: PRK0531 8 Location: 3989866-3991 1 65 bp Feature: gene Location: 4306955-4307188 bp Feature: domain Description: DinI Location: 4306997-4307183 bp Feature: domain Description: DinI Location: 4306997-43071 83 bp Feature: gene Location: 4307199-4307387 bp Feature: gene Location: 4307488-4308972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4307890-4308580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4307890-4308580 bp Feature: gene Location: 4308981-4309148 bp Feature: gene Location: 4309451-4311865 bp Feature: domain Description: Phage_GPA Location: 4310015-4310981 bp Feature: domain Description: Phage_GPA Location: 431 001 5-431 0981 bp Feature: gene Location: 4316599-4318083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4317001-4317691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 7001 -431 7691 bp Feature: gene Location: 4318092-4318259 bp Feature: gene Location: 4318502-4319554 bp Feature: domain Description: int Location: 4318505-4319504 bp Feature: domain Description: int Location: 431 8505-431 9504 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dam (TIGR00571), Phage_GPA (pfam05840), RVT-GII, DinI (pfam06183), SbcB (COG2925), dacD (PRK11397), PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PRK10597 (DNA damage-inducible protein I; Provisional)
Laminin_G_3 (pfam13385), umuC (PRK03609), PinE (COG1961), LexA_DNA_bind (pfam01726), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), int (PHA02601)

Seq: CP029228.2 Klebsiella pneumoniae strain L491 plasmid p3-L491, complete sequence (177614 bp)
Overview 1 RT 1: 161243-165104 bp Neighborhood of RT #1 [161243, 165104] HHA RVT-GII INT_Cre_C Feature: gene Location: 161243-161494 bp Feature: domain Description: HHA Location: 161291-161474 bp Feature: domain Description: HHA Location: 1612 91-161474 bp Feature: gene Location: 161529-161987 bp Feature: gene Location: 162012-163499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162417-163107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 417-163107 bp Feature: gene Location: 163585-164721 bp Feature: domain Description: INT_Cre_C Location: 164008-164662 bp Feature: domain Description: INT_Cre_C Location: 164008-164662 bp Feature: gene Location: 164787-165104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP029229.1 Klebsiella pneumoniae strain L491 plasmid p4-L491 (11970 bp)
Overview 1 RT 1: 199-2576 bp Neighborhood of RT #1 [199, 2576] RVT-GII Feature: gene Location: 199-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 604-1294 bp Feature: gene Location: 1692-1859 bp Feature: gene Location: 2331-2576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: CP029230.1 Klebsiella pneumoniae strain L491 plasmid pKPC-L491 (249533 bp)
Overview 1 RT 1: 11812-15449 bp 2 RT 2: 117102-120032 bp 3 RT 3: 183019-187101 bp Neighborhood of RT #1 [11812, 15449] DUF1380 RVT_N RVT-GII GIIM HNHc Neighborhood of RT #2 [117102, 120032] RVT_N RVT-GII GIIM HNHc Neighborhood of RT #3 [183019, 187238] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 11812-12234 bp Feature: domain Description: DUF1380 Location: 11815-12109 bp Feature: domain Description: DUF1380 Location: 11815-12109 bp Feature: gene Location: 12231-12422 bp Feature: gene Location: 12736-14403 bp Feature: RT Description: RVT_N Location: 12784-13021 bp Feature: RT Description: RVT_N Location: 12784 -13021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13072-13714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13072-13714 bp Feature: domain Description: GIIM Note: maturase Location: 13765-13999 bp Feature: domain Description: GIIM Note: maturase Location: 13765-13999 bp Feature: domain Description: HNHc Note: nucleases Location: 14209-14368 bp Feature: domain Description: HNHc Note: nucleases Location: 14 209-14 368 bp Feature: gene Location: 14683-14865 bp Feature: gene Location: 15117-15449 bp Feature: gene Location: 117102-117296 bp Feature: gene Location: 117309-117443 bp Feature: gene Location: 117516-119183 bp Feature: RT Description: RVT_N Location: 117564-117801 bp Feature: RT Description: RVT_N Location: 117564 -117801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117852-118494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117852-1184 94 bp Feature: domain Description: GIIM Note: maturase Location: 118545-118779 bp Feature: domain Description: GIIM Note: maturase Location: 11854 5-118779 bp Feature: domain Description: HNHc Note: nucleases Location: 118989-119148 bp Feature: domain Description: HNHc Note: nucleases Location: 118989-11914 8 bp Feature: gene Location: 119463-119645 bp Feature: gene Location: 119757-120032 bp Feature: gene Location: 183019-183450 bp Feature: domain Description: PRK10276 Location: 183070-183433 bp Feature: domain Description: PRK10276 Location: 183070-1834 33 bp Feature: gene Location: 183648-183860 bp Feature: gene Location: 183935-185344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184262-184952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184 262-184 952 bp Feature: gene Location: 185593-186564 bp Feature: domain Description: StbA Location: 185596-186541 bp Feature: domain Description: StbA Location: 185596-18654 1 bp Feature: gene Location: 186567-187238 bp Feature: domain Description: Plasmid_stab_B Location: 186582-186789 bp Feature: domain Description: Plasmid_stab_B Location: 186582-186789 bp Feature: domain Description: Plasmid_stab_B Location: 186894-187101 bp Feature: domain Description: Plasmid_stab_B Location: 186894 -187101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), StbA (pfam06406), Plasmid_stab_B (pfam10784)