myRT

myRT report for GCA_003113245.1_ASM311324v1

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Seq: PYDU01000008.1 Methylocystis sp. MitZ-2018 NODE_13_length_171682_cov_11.863932, whole genome shotgun sequence (171682 bp)
Overview 1 RT 1: 67265-70980 bp Neighborhood of RT #1 [67265, 70980] PinE RVT-UG12 Feature: gene Location: 67265-67483 bp Feature: gene Location: 67886-68485 bp Feature: domain Description: PinE Location: 67889-68447 bp Feature: domain Description: PinE Location: 67889-68447 bp Feature: gene Location: 68660-70381 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 69083-69536 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 69083-69536 bp Feature: gene Location: 70768-70980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-UG12

Seq: PYDU01000017.1 Methylocystis sp. MitZ-2018 NODE_27_length_97413_cov_11.846723, whole genome shotgun sequence (97413 bp)
Overview 1 RT 1: 91283-95625 bp Neighborhood of RT #1 [91283, 95625] DUF3489 RVT-UG20 Feature: gene Location: 91283-91660 bp Feature: domain Description: DUF3489 Location: 91448-91640 bp Feature: domain Description: DUF3489 Location: 91448-91640 bp Feature: gene Location: 91344-91697 bp Feature: gene Location: 92334-93962 bp Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 92715-93213 bp Feature: RT Description: RVT-UG2 0 Note: UG2 0 RT Location: 92 715-932 13 bp Feature: gene Location: 94045-94575 bp Feature: gene Location: 95149-95625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3489 (pfam11994), RVT-UG20

Seq: PYDU01000021.1 Methylocystis sp. MitZ-2018 NODE_38_length_73626_cov_14.142995, whole genome shotgun sequence (73626 bp)
Overview 1 RT 1: 248-1259 bp Neighborhood of RT #1 [248, 1261] RVT-GII TnpB_IS66 HTH_Tnp_1 Feature: gene Location: 248-406 bp Feature: gene Location: 418-672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421-667 bp Feature: gene Location: 692-901 bp Feature: domain Description: TnpB_IS66 Location: 713-872 bp Feature: domain Description: TnpB_IS66 Location: 713 -872 bp Feature: gene Location: 1082-1261 bp Feature: domain Description: HTH_Tnp_1 Location: 1154-1259 bp Feature: domain Description: HTH_Tnp_1 Location: 1154-1259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TnpB_IS66 (pfam05717), HTH_Tnp_1 (pfam01527)

Seq: PYDU01000026.1 Methylocystis sp. MitZ-2018 NODE_53_length_54328_cov_13.891571, whole genome shotgun sequence (54328 bp)
Overview 1 RT 1: 42024-45355 bp Neighborhood of RT #1 [42024, 45558] RVT-GII GIIM PRK10463 hypE Feature: gene Location: 42024-42344 bp Feature: gene Location: 42520-42801 bp Feature: gene Location: 42888-43712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42894-43221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 2894 -4 3221 bp Feature: domain Description: GIIM Note: maturase Location: 43299-43533 bp Feature: domain Description: GIIM Note: maturase Location: 4 3299-4 3533 bp Feature: gene Location: 43929-44681 bp Feature: domain Description: PRK10463 Location: 43935-44514 bp Feature: domain Description: PRK104 63 Location: 4 3935-4 4 514 bp Feature: gene Location: 44764-45558 bp Feature: domain Description: hypE Location: 44767-45355 bp Feature: domain Description: hypE Location: 4 4 767-4 5355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK10463 (hydrogenase nickel incorporation protein HypB; Provisional), hypE (TIGR02124)