myRT

myRT report for GCA_003113295.1_ASM311329v1

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Seq: BDHU01000011.1 Escherichia coli O26 DNA, contig: 2601-08_contig011, strain: NIID141423, whole genome shotgun sequence (133952 bp)
Overview 1 RT 1: 104593-108983 bp Neighborhood of RT #1 [104593, 108983] DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 104593-104838 bp Feature: gene Location: 104838-105224 bp Feature: domain Description: DUF932 Location: 104844-105189 bp Feature: domain Description: DUF932 Location: 1 04844-1 051 89 bp Feature: gene Location: 105682-107460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105943-106738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05943-1 06738 bp Feature: domain Description: Intron_maturas2 Location: 106864-107089 bp Feature: domain Description: Intron_maturas2 Location: 1 06864-1 07089 bp Feature: domain Description: HNHc Note: nucleases Location: 107284-107434 bp Feature: domain Description: HNHc Note: nucleases Location: 1 07284-1 07434 bp Feature: gene Location: 107952-108353 bp Feature: domain Description: DUF932 Location: 108063-108345 bp Feature: domain Description: DUF932 Location: 1 08063-1 08345 bp Feature: gene Location: 108573-108983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)