myRT

myRT report for GCA_003113415.1_ASM311341v1

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Seq: BDHV01000067.1 Escherichia coli O26 DNA, contig: 2601-09_contig067, strain: NIID141425, whole genome shotgun sequence (34750 bp)
Overview 1 RT 1: 4361-8799 bp Neighborhood of RT #1 [4361, 8799] DUF932 DUF932 RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 4361-4621 bp Feature: domain Description: DUF932 Location: 4433-4586 bp Feature: domain Description: DUF932 Location: 4433-4586 bp Feature: gene Location: 4654-5040 bp Feature: domain Description: DUF932 Location: 4660-5005 bp Feature: domain Description: DUF932 Location: 4660-5005 bp Feature: gene Location: 5498-7276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5759-6554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5759-6554 bp Feature: domain Description: Intron_maturas2 Location: 6680-6905 bp Feature: domain Description: Intron_maturas2 Location: 6680-6905 bp Feature: domain Description: HNHc Note: nucleases Location: 7100-7250 bp Feature: domain Description: HNHc Note: nucleases Location: 71 00-7250 bp Feature: gene Location: 7768-8169 bp Feature: domain Description: DUF932 Location: 7879-8161 bp Feature: domain Description: DUF932 Location: 7879-81 61 bp Feature: gene Location: 8389-8799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)