myRT

myRT report for GCA_003113455.1_ASM311345v1

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Seq: QDAA01000006.1 Edwardsiella tarda strain LADL99-302 Edwardsiella-tarda-LADL99-302-contig-6, whole genome shotgun sequence (345620 bp)
Overview 1 RT 1: 110213-117355 bp Neighborhood of RT #1 [110213, 117396] PRK10458 PHA02517 RVT-GII GIIM PHA02517 ANK PRK05658 Feature: gene Location: 110213-111637 bp Feature: domain Description: PRK10458 Location: 110240-111629 bp Feature: domain Description: PRK1 0458 Location: 1 1 0240-1 1 1 629 bp Feature: gene Location: 112189-112557 bp Feature: domain Description: PHA02517 Location: 112228-112492 bp Feature: domain Description: PHA0251 7 Location: 1 1 2228-1 1 2492 bp Feature: gene Location: 113149-114672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113422-114154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3422-1 1 41 54 bp Feature: domain Description: GIIM Note: maturase Location: 114229-114451 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 4229-1 1 4451 bp Feature: gene Location: 114798-115211 bp Feature: domain Description: PHA02517 Location: 114804-115203 bp Feature: domain Description: PHA0251 7 Location: 1 1 4804-1 1 5203 bp Feature: gene Location: 115366-117396 bp Feature: domain Description: ANK Location: 115411-115639 bp Feature: domain Description: ANK Location: 1 1 541 1 -1 1 5639 bp Feature: domain Description: PRK05658 Location: 116626-117355 bp Feature: domain Description: PRK05658 Location: 1 1 6626-1 1 7355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10458 (DNA cytosine methylase; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), ANK (smart00248), PRK05658 (RNA polymerase sigma factor RpoD; Validated)