myRT

myRT report for GCA_003113495.1_ASM311349v1

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Seq: QDAC01000017.1 Edwardsiella tarda ATCC 15947 = NBRC 105688 strain ATCC 15947 Edwardsiella-tarda-ATCC-15947-contig-17, whole genome shotgun sequence (27074 bp)
Overview 1 RT 1: 5380-12821 bp Neighborhood of RT #1 [5380, 12835] DDE_3 RVT-GII Na_sulph_symp HTH_Tnp_1 RVT-GII RVT-GII PHA02517 Feature: gene Location: 5380-5919 bp Feature: domain Description: DDE_3 Location: 5419-5839 bp Feature: domain Description: DDE_3 Location: 541 9-5839 bp Feature: gene Location: 6348-6635 bp Feature: gene Location: 6955-7182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6967-7180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6967-71 80 bp Feature: gene Location: 7332-8753 bp Feature: domain Description: Na_sulph_symp Location: 7350-8748 bp Feature: domain Description: Na_sulph_symp Location: 7350-8748 bp Feature: gene Location: 8968-9228 bp Feature: gene Location: 10016-10222 bp Feature: domain Description: HTH_Tnp_1 Location: 10022-10193 bp Feature: domain Description: HTH_Tnp_1 Location: 1 0022-1 01 93 bp Feature: gene Location: 10368-10667 bp Feature: gene Location: 11481-11699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11589-11664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 589-1 1 664 bp Feature: gene Location: 11786-11950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11792-11936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 792-1 1 936 bp Feature: gene Location: 12191-12361 bp Feature: gene Location: 12587-12835 bp Feature: domain Description: PHA02517 Location: 12593-12821 bp Feature: domain Description: PHA0251 7 Location: 1 2593-1 2821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, Na_sulph_symp (pfam00939), HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed)