myRT

myRT report for GCA_003113755.1_ASM311375v1

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Seq: BDII01000258.1 Escherichia coli O26 DNA, contig: 2612-22_contig258, strain: NIID082383, whole genome shotgun sequence (1904 bp)
Overview 1 RT 1: 2-1590 bp Neighborhood of RT #1 [2, 1661] DDE_Tnp_1_5 RVT-GII GIIM PHA02517 Feature: gene Location: 2-634 bp Feature: domain Description: DDE_Tnp_1_5 Location: 89-413 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 89-41 3 bp Feature: gene Location: 615-1253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633-867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 633-867 bp Feature: domain Description: GIIM Note: maturase Location: 945-1176 bp Feature: domain Description: GIIM Note: maturase Location: 945-1 1 76 bp Feature: gene Location: 1344-1661 bp Feature: domain Description: PHA02517 Location: 1347-1590 bp Feature: domain Description: PHA0251 7 Location: 1 347-1 590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388)