myRT

myRT report for GCA_003114915.1_ASM311491v1

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Seq: BFCL01000015.1 Citrobacter freundii MH17-012N DNA, contig_11_1, whole genome shotgun sequence (16808 bp)
Overview 1 RT 1: 276-3432 bp Neighborhood of RT #1 [276, 3449] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 276-653 bp Feature: domain Description: DDE_Tnp_IS1 Location: 279-651 bp Feature: domain Description: DDE_Tnp_IS1 Location: 279-651 bp Feature: gene Location: 698-973 bp Feature: domain Description: InsA Location: 701-965 bp Feature: domain Description: InsA Location: 701 -965 bp Feature: gene Location: 1125-2135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1131-1743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 31 -1 743 bp Feature: gene Location: 2247-2612 bp Feature: gene Location: 2766-3449 bp Feature: domain Description: PRK10276 Location: 3069-3432 bp Feature: domain Description: PRK1 0276 Location: 3069-3432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: BFCL01000033.1 Citrobacter freundii MH17-012N DNA, contig_23_1, whole genome shotgun sequence (158965 bp)
Overview 1 RT 1: 82633-88434 bp Neighborhood of RT #1 [82633, 88436] Psu RVT-UG15 PRK09692 PRK11462 Feature: gene Location: 82633-83199 bp Feature: domain Description: Psu Location: 82651-83194 bp Feature: domain Description: Psu Location: 82 651-83194 bp Feature: gene Location: 83446-83577 bp Feature: gene Location: 83703-85325 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 84114-84537 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 84114-84537 bp Feature: gene Location: 85341-86507 bp Feature: domain Description: PRK09692 Location: 85347-86493 bp Feature: domain Description: PRK09692 Location: 85347-86493 bp Feature: gene Location: 87054-88436 bp Feature: domain Description: PRK11462 Location: 87057-88434 bp Feature: domain Description: PRK11462 Location: 87057-88434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG15, PRK09692 (Integrase; provisional), PRK11462 (putative transporter; Provisional)