myRT

myRT report for GCA_003115195.1_ASM311519v1

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Seq: BFCZ01000024.1 Klebsiella pneumoniae MH17-556D DNA, contig_11_1, whole genome shotgun sequence (72195 bp)
Overview 1 RT 1: 64548-71416 bp Neighborhood of RT #1 [64548, 71418] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 64548-65276 bp Feature: domain Description: FimC Location: 64596-65259 bp Feature: domain Description: FimC Location: 64596-65259 bp Feature: gene Location: 65308-67917 bp Feature: domain Description: FimD Location: 65365-67906 bp Feature: domain Description: FimD Location: 65365-67906 bp Feature: gene Location: 67917-69995 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68325-68769 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68325-68769 bp Feature: gene Location: 70052-70492 bp Feature: domain Description: Integrase_1 Location: 70058-70274 bp Feature: domain Description: Integrase_1 Location: 70058-70274 bp Feature: gene Location: 70753-71418 bp Feature: domain Description: INT_P4_C Location: 70858-71416 bp Feature: domain Description: INT_P4_C Location: 70858-71 41 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: BFCZ01000083.1 Klebsiella pneumoniae MH17-556D DNA, contig_50_1, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 1-1459 bp Neighborhood of RT #1 [1, 1851] RVT-GII Feature: gene Location: 1-210 bp Feature: gene Location: 364-1851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 769-1459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 769-1459 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII