myRT

myRT report for GCA_003115235.1_ASM311523v1

Download annotations/find similar RTs

Seq: BFDB01000033.1 Klebsiella pneumoniae MH17-017D DNA, contig_16_1, whole genome shotgun sequence (72166 bp)
Overview 1 RT 1: 64474-71342 bp Neighborhood of RT #1 [64474, 71344] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 64474-65202 bp Feature: domain Description: FimC Location: 64522-65185 bp Feature: domain Description: FimC Location: 64522-651 85 bp Feature: gene Location: 65234-67843 bp Feature: domain Description: FimD Location: 65291-67832 bp Feature: domain Description: FimD Location: 65291 -67832 bp Feature: gene Location: 67843-69921 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68251-68695 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 68251 -68695 bp Feature: gene Location: 69978-70418 bp Feature: domain Description: Integrase_1 Location: 69984-70200 bp Feature: domain Description: Integrase_1 Location: 69984-70200 bp Feature: gene Location: 70679-71344 bp Feature: domain Description: INT_P4_C Location: 70784-71342 bp Feature: domain Description: INT_P4_C Location: 70784-71 342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: BFDB01000048.1 Klebsiella pneumoniae MH17-017D DNA, contig_26_1, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII