myRT

myRT report for GCA_003115255.1_ASM311525v1

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Seq: BFDC01000111.1 Klebsiella pneumoniae MH16-444M DNA, contig_65_1, whole genome shotgun sequence (8123 bp)
Overview 1 RT 1: 935-7788 bp Neighborhood of RT #1 [935, 7805] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 935-1600 bp Feature: domain Description: INT_P4_C Location: 1040-1598 bp Feature: domain Description: INT_P4_C Location: 1 040-1 598 bp Feature: gene Location: 1861-2301 bp Feature: domain Description: Integrase_1 Location: 1867-2083 bp Feature: domain Description: Integrase_1 Location: 1 867-2083 bp Feature: gene Location: 2358-4436 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2766-3210 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2766-321 0 bp Feature: gene Location: 4436-7045 bp Feature: domain Description: FimD Location: 4493-7034 bp Feature: domain Description: FimD Location: 4493-7034 bp Feature: gene Location: 7077-7805 bp Feature: domain Description: FimC Location: 7125-7788 bp Feature: domain Description: FimC Location: 71 25-7788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: BFDC01000226.1 Klebsiella pneumoniae MH16-444M DNA, contig_137_2, whole genome shotgun sequence (9675 bp)
Overview 1 RT 1: 5500-8708 bp Neighborhood of RT #1 [5500, 8708] PRK10276 RVT-GII Feature: gene Location: 5500-5925 bp Feature: domain Description: PRK10276 Location: 5503-5911 bp Feature: domain Description: PRK102 76 Location: 5503-5911 bp Feature: gene Location: 6043-6276 bp Feature: gene Location: 6327-7862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6732-7470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6732 -7470 bp Feature: gene Location: 8096-8326 bp Feature: gene Location: 8385-8708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII