myRT

myRT report for GCA_003115295.1_ASM311529v1

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Seq: BFDE01000211.1 Klebsiella pneumoniae MH17-536D DNA, contig_104_1, whole genome shotgun sequence (11540 bp)
Overview 1 RT 1: 4352-11205 bp Neighborhood of RT #1 [4352, 11222] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 4352-5017 bp Feature: domain Description: INT_P4_C Location: 4457-5015 bp Feature: domain Description: INT_P4_C Location: 4457-501 5 bp Feature: gene Location: 5278-5718 bp Feature: domain Description: Integrase_1 Location: 5284-5500 bp Feature: domain Description: Integrase_1 Location: 5284-5500 bp Feature: gene Location: 5775-7853 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6183-6627 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 61 83-6627 bp Feature: gene Location: 7853-10462 bp Feature: domain Description: FimD Location: 7910-10451 bp Feature: domain Description: FimD Location: 791 0-1 0451 bp Feature: gene Location: 10494-11222 bp Feature: domain Description: FimC Location: 10542-11205 bp Feature: domain Description: FimC Location: 1 0542-1 1 205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: BFDE01000226.1 Klebsiella pneumoniae MH17-536D DNA, contig_117_1, whole genome shotgun sequence (11177 bp)
Overview 1 RT 1: 1824-5118 bp Neighborhood of RT #1 [1824, 5132] RVT-GII PRK10276 Feature: gene Location: 1824-2039 bp Feature: gene Location: 2306-2536 bp Feature: gene Location: 2770-4305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3175-3913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3175-3913 bp Feature: gene Location: 4356-4589 bp Feature: gene Location: 4707-5132 bp Feature: domain Description: PRK10276 Location: 4710-5118 bp Feature: domain Description: PRK102 76 Location: 4710-5118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)