myRT

myRT report for GCA_003115335.1_ASM311533v1

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Seq: BFDG01000025.1 Klebsiella pneumoniae MH17-011M DNA, contig_16_1, whole genome shotgun sequence (115176 bp)
Overview 1 RT 1: 107484-114352 bp Neighborhood of RT #1 [107484, 114354] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 107484-108212 bp Feature: domain Description: FimC Location: 107532-108195 bp Feature: domain Description: FimC Location: 1 07532-1 081 95 bp Feature: gene Location: 108244-110853 bp Feature: domain Description: FimD Location: 108301-110842 bp Feature: domain Description: FimD Location: 1 08301 -1 1 0842 bp Feature: gene Location: 110853-112931 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 111261-111705 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 1 261 -1 1 1 705 bp Feature: gene Location: 112988-113428 bp Feature: domain Description: Integrase_1 Location: 112994-113210 bp Feature: domain Description: Integrase_1 Location: 1 1 2994-1 1 321 0 bp Feature: gene Location: 113689-114354 bp Feature: domain Description: INT_P4_C Location: 113794-114352 bp Feature: domain Description: INT_P4_C Location: 1 1 3794-1 1 4352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: BFDG01000081.1 Klebsiella pneumoniae MH17-011M DNA, contig_46_1, whole genome shotgun sequence (14052 bp)
Overview 1 RT 1: 10398-13601 bp Neighborhood of RT #1 [10398, 13993] umuC PRK10276 RVT-GII Feature: gene Location: 10398-11669 bp Feature: domain Description: umuC Location: 10401-11661 bp Feature: domain Description: umuC Location: 10401-11661 bp Feature: gene Location: 11669-12481 bp Feature: domain Description: PRK10276 Location: 12101-12464 bp Feature: domain Description: PRK102 76 Location: 12 101-12 464 bp Feature: gene Location: 12506-13993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12911-13601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 911-13601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII