myRT

myRT report for GCA_003117395.1_ASM311739v1

Download annotations/find similar RTs

Seq: QDTK01000022.1 Salmonella enterica subsp. enterica serovar Braenderup strain 30 NODE_22_length_60031_cov_47.4818, whole genome shotgun sequence (60031 bp)
Overview 1 RT 1: 26489-32292 bp Neighborhood of RT #1 [26489, 32294] FmrO Zn_Tnp_IS91 Y2_Tnp RVT-GII GIIM Multi_Drug_Res PRK13753 Feature: gene Location: 26489-27310 bp Feature: domain Description: FmrO Location: 26528-27272 bp Feature: domain Description: FmrO Location: 26528-27272 bp Feature: gene Location: 27638-28930 bp Feature: domain Description: Zn_Tnp_IS91 Location: 27683-27956 bp Feature: domain Description: Zn_Tnp_IS91 Location: 27683-27956 bp Feature: domain Description: Y2_Tnp Location: 28094-28583 bp Feature: domain Description: Y2_Tnp Location: 28094-28583 bp Feature: gene Location: 29092-30441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29374-29992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29374-29992 bp Feature: domain Description: GIIM Note: maturase Location: 30040-30244 bp Feature: domain Description: GIIM Note: maturase Location: 30040-30244 bp Feature: gene Location: 31114-31461 bp Feature: domain Description: Multi_Drug_Res Location: 31123-31396 bp Feature: domain Description: Multi_Drug_Res Location: 31 1 23-31 396 bp Feature: gene Location: 31455-32294 bp Feature: domain Description: PRK13753 Location: 31458-32292 bp Feature: domain Description: PRK1 3753 Location: 31 458-32292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FmrO (pfam07091), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT-GII, GIIM (pfam08388), Multi_Drug_Res (pfam00893), PRK13753 (dihydropteroate synthase; Provisional)

Seq: QDTK01000007.1 Salmonella enterica subsp. enterica serovar Braenderup strain 30 NODE_7_length_258286_cov_22.6374, whole genome shotgun sequence (258286 bp)
Overview 1 RT 1: 167666-173971 bp Neighborhood of RT #1 [167666, 173973] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 167666-169366 bp Feature: domain Description: 5 Location: 168890-169184 bp Feature: domain Description: 5 Location: 168890-169184 bp Feature: gene Location: 169496-169663 bp Feature: gene Location: 170273-171037 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 170396-170849 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 170396-170849 bp Feature: gene Location: 171361-171867 bp Feature: domain Description: PRK10201 Location: 171364-171862 bp Feature: domain Description: PRK102 01 Location: 171364-171862 bp Feature: gene Location: 171991-173973 bp Feature: domain Description: PRK05658 Location: 172129-173971 bp Feature: domain Description: PRK05658 Location: 172 12 9-173971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)