myRT

myRT report for GCA_003118915.1_ASM311891v1

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Seq: QDOQ01000015.1 Salmonella enterica subsp. enterica serovar Muenchen strain 157 NODE_15_length_67801_cov_30.1023, whole genome shotgun sequence (67801 bp)
Overview 1 RT 1: 60241-66133 bp Neighborhood of RT #1 [60241, 66135] HTH_Tnp_1 HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 60241-60378 bp Feature: domain Description: HTH_Tnp_1 Location: 60247-60343 bp Feature: domain Description: HTH_Tnp_1 Location: 60247-60343 bp Feature: gene Location: 60759-61169 bp Feature: domain Description: HTH_Tnp_1 Location: 60774-60891 bp Feature: domain Description: HTH_Tnp_1 Location: 60774-60891 bp Feature: gene Location: 61247-62878 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61562-62159 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 562-621 59 bp Feature: domain Description: TIR_2 Location: 62483-62843 bp Feature: domain Description: TIR_2 Location: 62483-62843 bp Feature: gene Location: 63467-65800 bp Feature: domain Description: Prim_Zn_Ribbon Location: 63557-63665 bp Feature: domain Description: Prim_Zn_Ribbon Location: 63557-63665 bp Feature: domain Description: COG3378 Location: 64274-65789 bp Feature: domain Description: COG3378 Location: 64274-65789 bp Feature: gene Location: 65815-66135 bp Feature: domain Description: DUF5375 Location: 65818-66133 bp Feature: domain Description: DUF5375 Location: 6581 8-661 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)