myRT

myRT report for GCA_003119075.1_ASM311907v1

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Seq: QDOZ01000004.1 Salmonella enterica subsp. enterica serovar Muenster strain 145 NODE_4_length_398702_cov_27.7945, whole genome shotgun sequence (398702 bp)
Overview 1 RT 1: 59549-64920 bp Neighborhood of RT #1 [59549, 64925] HTH_Tnp_1 RVT-Retrons TIR_2 Prim_Zn_Ribbon COG3378 DUF5375 Feature: gene Location: 59549-59746 bp Feature: domain Description: HTH_Tnp_1 Location: 59564-59681 bp Feature: domain Description: HTH_Tnp_1 Location: 59564-59681 bp Feature: gene Location: 59762-59959 bp Feature: gene Location: 60037-61668 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60352-60949 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60352-60949 bp Feature: domain Description: TIR_2 Location: 61273-61633 bp Feature: domain Description: TIR_2 Location: 61 273-61 633 bp Feature: gene Location: 62257-64590 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62347-62455 bp Feature: domain Description: Prim_Zn_Ribbon Location: 62347-62455 bp Feature: domain Description: COG3378 Location: 63073-64582 bp Feature: domain Description: COG3378 Location: 63073-64582 bp Feature: gene Location: 64605-64925 bp Feature: domain Description: DUF5375 Location: 64608-64920 bp Feature: domain Description: DUF5375 Location: 64608-64920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-Retrons, TIR_2 (pfam13676), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), DUF5375 (pfam17345)