myRT

myRT report for GCA_003120955.1_ASM312095v1

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Seq: QDSJ01000018.1 Salmonella enterica subsp. enterica serovar Braenderup strain 57 NODE_18_length_60478_cov_52.4623, whole genome shotgun sequence (60478 bp)
Overview 1 RT 1: 29018-33952 bp Neighborhood of RT #1 [29018, 33990] Multi_Drug_Res RVT-GII GIIM Zn_Tnp_IS91 Y2_Tnp FmrO Feature: gene Location: 29018-29365 bp Feature: domain Description: Multi_Drug_Res Location: 29027-29300 bp Feature: domain Description: Multi_Drug_Res Location: 29027-29300 bp Feature: gene Location: 29698-29916 bp Feature: gene Location: 30038-31387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30320-30938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30320-30938 bp Feature: domain Description: GIIM Note: maturase Location: 30986-31190 bp Feature: domain Description: GIIM Note: maturase Location: 30986-31 1 90 bp Feature: gene Location: 31549-32841 bp Feature: domain Description: Zn_Tnp_IS91 Location: 31594-31867 bp Feature: domain Description: Zn_Tnp_IS91 Location: 31 594-31 867 bp Feature: domain Description: Y2_Tnp Location: 32005-32494 bp Feature: domain Description: Y2_Tnp Location: 32005-32494 bp Feature: gene Location: 33169-33990 bp Feature: domain Description: FmrO Location: 33208-33952 bp Feature: domain Description: FmrO Location: 33208-33952 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Multi_Drug_Res (pfam00893), RVT-GII, GIIM (pfam08388), Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), FmrO (pfam07091)

Seq: QDSJ01000002.1 Salmonella enterica subsp. enterica serovar Braenderup strain 57 NODE_2_length_454209_cov_27.6523, whole genome shotgun sequence (454209 bp)
Overview 1 RT 1: 167666-173971 bp Neighborhood of RT #1 [167666, 173973] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 167666-169366 bp Feature: domain Description: 5 Location: 168890-169184 bp Feature: domain Description: 5 Location: 168890-169184 bp Feature: gene Location: 169496-169663 bp Feature: gene Location: 170273-171037 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 170396-170849 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 170396-170849 bp Feature: gene Location: 171361-171867 bp Feature: domain Description: PRK10201 Location: 171364-171862 bp Feature: domain Description: PRK102 01 Location: 171364-171862 bp Feature: gene Location: 171991-173973 bp Feature: domain Description: PRK05658 Location: 172129-173971 bp Feature: domain Description: PRK05658 Location: 172 12 9-173971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)