myRT

myRT report for GCA_003121015.1_ASM312101v1

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Seq: QDSL01000004.1 Salmonella enterica subsp. enterica serovar Bareilly strain 55 NODE_4_length_253132_cov_28.3789, whole genome shotgun sequence (253132 bp)
Overview 1 RT 1: 73704-76925 bp Neighborhood of RT #1 [73704, 76966] RVT-Retrons TIR-like Tra5 Feature: gene Location: 73704-73835 bp Feature: gene Location: 73982-74209 bp Feature: gene Location: 74240-75199 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74420-74942 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74420-74942 bp Feature: gene Location: 75249-76088 bp Feature: domain Description: TIR-like Location: 75654-76008 bp Feature: domain Description: TIR-like Location: 75654-76008 bp Feature: gene Location: 76343-76966 bp Feature: domain Description: Tra5 Location: 76364-76925 bp Feature: domain Description: Tra5 Location: 76364-76925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, TIR-like (pfam10137), Tra5 (COG2801)

Seq: QDSL01000007.1 Salmonella enterica subsp. enterica serovar Bareilly strain 55 NODE_7_length_202374_cov_29.7168, whole genome shotgun sequence (202374 bp)
Overview 1 RT 1: 1151-5300 bp Neighborhood of RT #1 [1151, 5314] PRK09678 RVT-Retrons COG3440 Feature: gene Location: 1151-1423 bp Feature: domain Description: PRK09678 Location: 1160-1316 bp Feature: domain Description: PRK09678 Location: 1160-1316 bp Feature: gene Location: 2043-3029 bp Feature: gene Location: 3031-3963 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3133-3727 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3133-372 7 bp Feature: gene Location: 4183-4434 bp Feature: gene Location: 4439-5314 bp Feature: domain Description: COG3440 Location: 4454-5300 bp Feature: domain Description: COG3440 Location: 4454-5300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, COG3440 (Predicted restriction endonuclease )