myRT

myRT report for GCA_003121295.1_ASM312129v1

Download annotations/find similar RTs

Seq: PHNC01000011.1 Streptomyces orinoci strain NRRL B-3379 Streptomyces_orinoci_NRRL_B-3379_contig_11, whole genome shotgun sequence (234245 bp)
Overview 1 RT 1: 142518-147277 bp Neighborhood of RT #1 [142518, 147282] Nudix_Hydrolase_28 PHA02517 RVT-GII Intron_maturas2 HNHc InsE HTH_17 Feature: gene Location: 142518-142883 bp Feature: domain Description: Nudix_Hydrolase_28 Location: 142554-142860 bp Feature: domain Description: Nudix_Hydrolase_28 Location: 1 42554-1 42860 bp Feature: gene Location: 143188-143529 bp Feature: domain Description: PHA02517 Location: 143197-143518 bp Feature: domain Description: PHA0251 7 Location: 1 431 97-1 4351 8 bp Feature: gene Location: 143721-145508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143985-144780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 43985-1 44780 bp Feature: domain Description: Intron_maturas2 Location: 144891-145113 bp Feature: domain Description: Intron_maturas2 Location: 1 44891 -1 451 1 3 bp Feature: domain Description: HNHc Note: nucleases Location: 145293-145464 bp Feature: domain Description: HNHc Note: nucleases Location: 1 45293-1 45464 bp Feature: gene Location: 146457-146687 bp Feature: domain Description: InsE Location: 146463-146679 bp Feature: domain Description: InsE Location: 1 46463-1 46679 bp Feature: gene Location: 147094-147282 bp Feature: domain Description: HTH_17 Location: 147115-147277 bp Feature: domain Description: HTH_1 7 Location: 1 471 1 5-1 47277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_28 (cd04687), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), InsE (COG2963), HTH_17 (pfam12728)