myRT

myRT report for GCA_003121425.1_ASM312142v1

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Seq: QBUZ01000021.1 Klebsiella sp. C31 NODE_21_length_38477_cov_30.0411, whole genome shotgun sequence (38477 bp)
Overview 1 RT 1: 22335-28418 bp Neighborhood of RT #1 [22335, 28429] HoxN LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM HNHc RVT_N RVT-GII TnpB_IS66 Feature: gene Location: 22335-23588 bp Feature: domain Description: HoxN Location: 22581-23562 bp Feature: domain Description: HoxN Location: 22581 -23562 bp Feature: gene Location: 24189-25727 bp Feature: domain Description: LZ_Tnp_IS66 Location: 24306-24519 bp Feature: domain Description: LZ_Tnp_IS66 Location: 24306-2451 9 bp Feature: domain Description: zf-IS66 Location: 24543-24672 bp Feature: domain Description: zf-IS66 Location: 24543-24672 bp Feature: domain Description: DDE_Tnp_IS66 Location: 24717-25572 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2471 7-25572 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 25593-25704 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 25593-25704 bp Feature: gene Location: 25891-26847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25894-26143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25894-261 43 bp Feature: domain Description: GIIM Note: maturase Location: 26194-26428 bp Feature: domain Description: GIIM Note: maturase Location: 261 94-26428 bp Feature: domain Description: HNHc Note: nucleases Location: 26644-26800 bp Feature: domain Description: HNHc Note: nucleases Location: 26644-26800 bp Feature: gene Location: 26853-27572 bp Feature: RT Description: RVT_N Location: 26901-27144 bp Feature: RT Description: RVT_N Location: 26901 -271 44 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27189-27525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 271 89-27525 bp Feature: gene Location: 27634-28005 bp Feature: gene Location: 28157-28429 bp Feature: domain Description: TnpB_IS66 Location: 28160-28418 bp Feature: domain Description: TnpB_IS66 Location: 281 60-2841 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HoxN (COG3376), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), TnpB_IS66 (pfam05717)