myRT

myRT report for GCA_003122145.1_ASM312214v1

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Seq: QEYI01000017.1 Arcobacter skirrowii strain 17-1208-2 NODE_17_length_3998_cov_6.92405, whole genome shotgun sequence (3998 bp)
Overview 1 RT 1: 69-3837 bp Neighborhood of RT #1 [69, 3842] L1-EN RVT-UNC DUF1725 Feature: gene Location: 69-3842 bp Feature: domain Description: L1-EN Location: 99-780 bp Feature: domain Description: L1 -EN Location: 99-780 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1653-2310 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 653-231 0 bp Feature: domain Description: DUF1725 Location: 3795-3837 bp Feature: domain Description: DUF1 725 Location: 3795-3837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), DUF1725 (pfam08333)

Seq: QEYI01000003.1 Arcobacter skirrowii strain 17-1208-2 NODE_3_length_276404_cov_65.3064, whole genome shotgun sequence (276404 bp)
Overview 1 RT 1: 271716-275128 bp Neighborhood of RT #1 [271716, 275244] AbiEii HTH_XRE RVT-GII HNHc Feature: gene Location: 271716-272483 bp Feature: domain Description: AbiEii Location: 271755-272286 bp Feature: domain Description: AbiEii Location: 2 71755-2 72 2 86 bp Feature: gene Location: 272484-273053 bp Feature: domain Description: HTH_XRE Location: 272538-272694 bp Feature: domain Description: HTH_XRE Location: 2 72 538-2 72 694 bp Feature: gene Location: 273379-275244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273694-274414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 73694-2 74414 bp Feature: domain Description: HNHc Note: nucleases Location: 274993-275128 bp Feature: domain Description: HNHc Note: nucleases Location: 2 74993-2 7512 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), HTH_XRE (smart00530), RVT-GII, HNHc (smart00507)