myRT

myRT report for GCA_003122525.1_ASM312252v1

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Seq: QFBA01000025.1 Lactobacillus johnsonii strain CRL1647 CRL1647_Contig_24, whole genome shotgun sequence (15529 bp)
Overview 1 RT 1: 456-4339 bp Neighborhood of RT #1 [456, 4374] AbiF RVT-UG2 RmlD_sub_bind Feature: gene Location: 456-617 bp Feature: gene Location: 737-865 bp Feature: domain Description: AbiF Location: 743-854 bp Feature: domain Description: AbiF Location: 743-854 bp Feature: gene Location: 1576-2901 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1780-2617 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 780-261 7 bp Feature: gene Location: 3033-3236 bp Feature: gene Location: 3388-4374 bp Feature: domain Description: RmlD_sub_bind Location: 3391-4339 bp Feature: domain Description: RmlD_sub_bind Location: 3391 -4339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiF (COG4823), RVT-UG2, RmlD_sub_bind (pfam04321)

Seq: QFBA01000006.1 Lactobacillus johnsonii strain CRL1647 CRL1647_Contig_5, whole genome shotgun sequence (229743 bp)
Overview 1 RT 1: 117937-120400 bp 2 RT 2: 123359-127411 bp Neighborhood of RT #1 [117937, 120400] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-UG2 Neighborhood of RT #2 [123359, 127411] RmlD_sub_bind RVT-UG2 PRK04897 Feature: gene Location: 117937-118320 bp Feature: domain Description: DDE_Tnp_IS66 Location: 117967-118150 bp Feature: domain Description: DDE_Tnp_IS66 Location: 117967-118150 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 118171-118291 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 118171-1182 91 bp Feature: gene Location: 118472-118684 bp Feature: gene Location: 118729-119796 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 119017-119779 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 119017-119779 bp Feature: gene Location: 119774-120118 bp Feature: gene Location: 120257-120400 bp Feature: gene Location: 123359-124000 bp Feature: domain Description: RmlD_sub_bind Location: 123362-123962 bp Feature: domain Description: RmlD_sub_bind Location: 12 3362 -12 3962 bp Feature: gene Location: 124148-124351 bp Feature: gene Location: 124483-125808 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 124684-125524 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12 4684-12 552 4 bp Feature: gene Location: 126186-127103 bp Feature: domain Description: PRK04897 Location: 126189-127086 bp Feature: domain Description: PRK04897 Location: 12 6189-12 7086 bp Feature: gene Location: 127232-127411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-UG2, RmlD_sub_bind (pfam04321), PRK04897 (heat shock protein HtpX; Provisional)

Seq: QFBA01000007.1 Lactobacillus johnsonii strain CRL1647 CRL1647_Contig_6, whole genome shotgun sequence (17079 bp)
Overview 1 RT 1: 196-2641 bp Neighborhood of RT #1 [196, 2641] RVT-UG2 AbiF Feature: gene Location: 196-1521 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 400-1237 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 400-123 7 bp Feature: gene Location: 2232-2360 bp Feature: domain Description: AbiF Location: 2238-2349 bp Feature: domain Description: AbiF Location: 223 8-23 49 bp Feature: gene Location: 2474-2641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, AbiF (COG4823)