myRT

myRT report for GCA_003123665.1_BS974

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Seq: QDEA01000129.1 Shigella flexneri strain BS974 BS974_130, whole genome shotgun sequence (3053 bp)
Overview 1 RT 1: 89-2986 bp Neighborhood of RT #1 [89, 3051] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 89-535 bp Feature: domain Description: PHA02517 Location: 92-533 bp Feature: domain Description: PHA0251 7 Location: 92-533 bp Feature: gene Location: 652-2175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925-1657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 925-1 657 bp Feature: domain Description: GIIM Note: maturase Location: 1732-1930 bp Feature: domain Description: GIIM Note: maturase Location: 1 732-1 930 bp Feature: gene Location: 2767-3051 bp Feature: domain Description: PHA02517 Location: 2779-2986 bp Feature: domain Description: PHA0251 7 Location: 2779-2986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: QDEA01000183.1 Shigella flexneri strain BS974 BS974_185, whole genome shotgun sequence (3338 bp)
Overview 1 RT 1: 1-1238 bp Neighborhood of RT #1 [1, 1238] RVT-GII GIIM Feature: gene Location: 1-321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10-313 bp Feature: gene Location: 374-700 bp Feature: domain Description: GIIM Note: maturase Location: 407-626 bp Feature: domain Description: GIIM Note: maturase Location: 407-62 6 bp Feature: gene Location: 1053-1238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QDEA01000186.1 Shigella flexneri strain BS974 BS974_188, whole genome shotgun sequence (5784 bp)
Overview 1 RT 1: 3117-5756 bp Neighborhood of RT #1 [3117, 5782] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3117-3602 bp Feature: domain Description: COG3547 Location: 3135-3588 bp Feature: domain Description: COG3 547 Location: 3 13 5-3 588 bp Feature: gene Location: 3698-3865 bp Feature: gene Location: 3891-5108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077-4731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077-473 1 bp Feature: domain Description: GIIM Note: maturase Location: 4809-5031 bp Feature: domain Description: GIIM Note: maturase Location: 4809-503 1 bp Feature: gene Location: 5119-5502 bp Feature: gene Location: 5585-5782 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5600-5756 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5600-5756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: QDEA01000371.1 Shigella flexneri strain BS974 BS974_373, whole genome shotgun sequence (554 bp)
Overview 1 RT 1: 1-505 bp Neighborhood of RT #1 [1, 504] RVT-GII Feature: gene Location: 1-504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301-505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QDEA01000468.1 Shigella flexneri strain BS974 BS974_477, whole genome shotgun sequence (374 bp)
Overview 1 RT 1: 3-360 bp Neighborhood of RT #1 [3, 371] RVT-GII Feature: gene Location: 3-371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII