myRT

myRT report for GCA_003130405.1_ASM313040v1

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Seq: QEAS01000037.1 Pedobacter sp. FJ4-8 contig-120_36, whole genome shotgun sequence (20108 bp)
Overview 1 RT 1: 12410-18316 bp Neighborhood of RT #1 [12410, 18981] P63C WYL RVT-Retrons REC Feature: gene Location: 12410-13021 bp Feature: domain Description: P63C Location: 12638-12899 bp Feature: domain Description: P63C Location: 1 2638-1 2899 bp Feature: gene Location: 13041-14054 bp Feature: domain Description: WYL Location: 13503-14037 bp Feature: domain Description: WYL Location: 1 3503-1 4037 bp Feature: gene Location: 14302-16590 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14533-15193 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4533-1 51 93 bp Feature: gene Location: 16587-17297 bp Feature: gene Location: 17266-18981 bp Feature: domain Description: REC Location: 17956-18316 bp Feature: domain Description: REC Location: 1 7956-1 831 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P63C (pfam10546), WYL (pfam13280), RVT-Retrons, REC (smart00448)

Seq: QEAS01000007.1 Pedobacter sp. FJ4-8 contig-120_6, whole genome shotgun sequence (292961 bp)
Overview 1 RT 1: 181576-185454 bp Neighborhood of RT #1 [181576, 185454] DUF4133 DUF4134 RVT-GII Intron_maturas2 Feature: gene Location: 181576-181932 bp Feature: domain Description: DUF4133 Location: 181597-181867 bp Feature: domain Description: DUF4133 Location: 181597-181867 bp Feature: gene Location: 182022-182366 bp Feature: domain Description: DUF4134 Location: 182148-182358 bp Feature: domain Description: DUF4134 Location: 182 148-182 358 bp Feature: gene Location: 182356-184176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182620-183439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182 62 0-183439 bp Feature: domain Description: Intron_maturas2 Location: 183514-183841 bp Feature: domain Description: Intron_maturas2 Location: 183514-183841 bp Feature: gene Location: 184733-184984 bp Feature: gene Location: 184975-185454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), DUF4134 (pfam13572), RVT-GII, Intron_maturas2 (pfam01348)