myRT

myRT report for GCA_003130915.1_ASM313091v1

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Seq: QFBZ01000012.1 Acinetobacter baumannii strain WE1926 15-WE1926_1_(paired)_trimmed_(paired)_contig_12, whole genome shotgun sequence (105999 bp)
Overview 1 RT 1: 31907-34886 bp Neighborhood of RT #1 [31907, 34886] HTH_XRE RVT-Retrons HEPN_Apea Feature: gene Location: 31907-32062 bp Feature: gene Location: 32129-32422 bp Feature: domain Description: HTH_XRE Location: 32147-32306 bp Feature: domain Description: HTH_XRE Location: 321 47-32306 bp Feature: gene Location: 32412-33314 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32622-33138 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32622-331 38 bp Feature: gene Location: 33359-34342 bp Feature: domain Description: HEPN_Apea Location: 33806-34121 bp Feature: domain Description: HEPN_Apea Location: 33806-341 21 bp Feature: gene Location: 34335-34886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, HEPN_Apea (pfam18739)

Seq: QFBZ01000013.1 Acinetobacter baumannii strain WE1926 15-WE1926_1_(paired)_trimmed_(paired)_contig_13, whole genome shotgun sequence (137710 bp)
Overview 1 RT 1: 16263-22743 bp Neighborhood of RT #1 [16263, 22748] AcrR RVT-G2L ClC_sycA_like PccA PccA Feature: gene Location: 16263-16823 bp Feature: domain Description: AcrR Location: 16299-16569 bp Feature: domain Description: AcrR Location: 162 99-16569 bp Feature: gene Location: 17503-18102 bp Feature: gene Location: 18143-19363 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 18374-19031 bp Feature: RT Description: RVT-G2 L Note: G2 L RT Location: 18374-19031 bp Feature: gene Location: 19506-20726 bp Feature: domain Description: ClC_sycA_like Location: 19575-20706 bp Feature: domain Description: ClC_sycA_like Location: 19575-2 0706 bp Feature: gene Location: 21030-22748 bp Feature: domain Description: PccA Location: 21042-22380 bp Feature: domain Description: PccA Location: 2 1042 -2 2 380 bp Feature: domain Description: PccA Location: 22506-22743 bp Feature: domain Description: PccA Location: 2 2 506-2 2 743 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-G2L, ClC_sycA_like (cd03682), PccA (COG4770)