myRT

myRT report for GCA_003131185.1_ASM313118v1

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Seq: QFFU01000018.1 Pseudomonas sp. F51 Scaffold18, whole genome shotgun sequence (124274 bp)
Overview 1 RT 1: 138-2233 bp Neighborhood of RT #1 [138, 2358] TnpB_IS66 RVT-GII GIIM TnpB_IS66 Feature: gene Location: 138-341 bp Feature: domain Description: TnpB_IS66 Location: 162-306 bp Feature: domain Description: TnpB_IS66 Location: 1 62-306 bp Feature: gene Location: 375-1643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-1 236 bp Feature: domain Description: GIIM Note: maturase Location: 1314-1536 bp Feature: domain Description: GIIM Note: maturase Location: 1 31 4-1 536 bp Feature: gene Location: 2050-2358 bp Feature: domain Description: TnpB_IS66 Location: 2080-2233 bp Feature: domain Description: TnpB_IS66 Location: 2080-2233 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388)

Seq: QFFU01000007.1 Pseudomonas sp. F51 Scaffold7, whole genome shotgun sequence (252323 bp)
Overview 1 RT 1: 249481-252061 bp Neighborhood of RT #1 [249481, 252321] DUF1566 Avd_like RVT-DGRs DUF2786 Feature: gene Location: 249481-250095 bp Feature: domain Description: DUF1566 Location: 249712-250078 bp Feature: domain Description: DUF1566 Location: 2 49712 -2 50078 bp Feature: gene Location: 250146-250496 bp Feature: domain Description: Avd_like Location: 250173-250479 bp Feature: domain Description: Avd_like Location: 2 50173-2 50479 bp Feature: gene Location: 250563-251855 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 250947-251631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 50947-2 51631 bp Feature: gene Location: 251908-252321 bp Feature: domain Description: DUF2786 Location: 251947-252061 bp Feature: domain Description: DUF2 786 Location: 2 51947-2 52 061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, DUF2786 (pfam10979)